RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ENTPD2Q9Y5L3 495 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 NCOR1O75376 2440 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 UNC13CQ8NB66 2214 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 YAP1P46937 504 aaKnown RBP11.9□□□□□ -0.5
CLCN6-206ENST00000376496 MRPS35P82673 323 aaKnown RBP11.9□□□□□ -0.5
CLCN6-206ENST00000376496 CYBRD1Q53TN4 286 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 LSRQ86X29 649 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-206ENST00000376496 ZCCHC7Q8N3Z6 543 aaKnown RBP11.9□□□□□ -0.5
CLCN6-206ENST00000376496 CSNK1A1LQ8N752 337 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 OR9A2Q8NGT5 310 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 GATA6Q92908 595 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 BTBD9Q96Q07 612 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 CES1P1Q9UKY3 287 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 NINQ8N4C6 2090 aa11.9□□□□□ -0.5
CLCN6-206ENST00000376496 SGK494L7N484 410 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 M0QX08 132 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 DEAF1O75398 565 aaPredicted RBP11.9□□□□□ -0.51
CLCN6-206ENST00000376496 PIAS2O75928 621 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 MED26O95402 600 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 PROS1P07225 676 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 LYNP07948 512 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 DRD2P14416 443 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 CPN2P22792 545 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 PPIBP23284 216 aaKnown RBP11.9□□□□□ -0.51
CLCN6-206ENST00000376496 HNRNPKP61978 463 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLCN6-206ENST00000376496 CDK6Q00534 326 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 SLC48A1Q6P1K1 146 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 IQCHQ86VS3 1027 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 GATAD2AQ86YP4 633 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 SLC25A45Q8N413 288 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 TMEM52Q8NDY8 209 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 NCSTNQ92542 709 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 TAMM41Q96BW9 452 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 BDH2Q9BUT1 245 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 EQTNQ9NQ60 294 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 ZCCHC3Q9NUD5 404 aaKnown RBP11.9□□□□□ -0.51
CLCN6-206ENST00000376496 NAALAD2Q9Y3Q0 740 aa11.9□□□□□ -0.51
CLCN6-206ENST00000376496 RP1P56715 2156 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 BDP1A6H8Y1 2624 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 LMO7DNF2Z398 122 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SNAP29O95721 258 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 BCHEP06276 602 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 NR2F6P10588 404 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 PCGF2P35227 344 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 FRKP42685 505 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 AFF3P51826 1226 aaKnown RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 LIM2P55344 173 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 DSTNP60981 165 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 TRA2BP62995 288 aaKnown RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 BNC1Q01954 994 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 LRRC74AQ0VAA2 488 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 MAP7Q14244 749 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 AMZ1Q400G9 498 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SAXO2Q658L1 398 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SLC36A4Q6YBV0 504 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 METTL27Q8N6F8 245 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SRFBP1Q8NEF9 429 aaKnown RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 C16orf58Q96GQ5 468 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 FBXL20Q96IG2 436 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 C9orf16Q9BUW7 83 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 KCMF1Q9P0J7 381 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 RAB23Q9ULC3 237 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SAMD4AQ9UPU9 718 aaKnown RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 CORO2BQ9UQ03 480 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 RNF215Q9Y6U7 377 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 MYO1GB0I1T2 1018 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 VILLO15195 856 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 TBX19O60806 448 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 LDB3O75112 727 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 RASAL1O95294 804 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SMIM10L1P0DMW3 83 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 ALOX12P18054 663 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 FUT4P22083 530 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 GSTM2P28161 218 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 NTSP30990 170 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 MC3RP41968 323 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 OR1D5P58170 312 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 ZXDAP98168 799 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 KCNAB1Q14722 419 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 CBLL1Q75N03 491 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 C19orf47Q8N9M1 422 aaKnown RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 CAMKVQ8NCB2 501 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 OR9A4Q8NGU2 314 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 CYGBQ8WWM9 190 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SMIM10Q96HG1 83 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 RSPO3Q9BXY4 272 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-206ENST00000376496 ASPSCR1Q9BZE9 553 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 SEMA6CQ9H3T2 930 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
CLCN6-206ENST00000376496 FAM221BA6H8Z2 402 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms