RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ATG2BQ96BY7 2078 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 LOC105371267A0A1B0GV96 52 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 A0A1W2PPV9 198 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 LATO43561 262 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ADH1BP00325 375 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 MT-ND2P03891 347 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 OPN1SWP03999 348 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 LCKP06239 509 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ACP5P13686 325 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 CHI3L1P36222 383 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 TRIM23P36406 574 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 PRIM2P49643 509 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 GALK2Q01415 458 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 CHRNEQ04844 493 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 AGERQ15109 404 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SLC5A12Q1EHB4 618 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ITPRIPL2Q3MIP1 535 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 CEP78Q5JTW2 689 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 GCNT6Q5T4J0 391 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 SLX4IPQ5VYV7 408 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 B3GNT8Q7Z7M8 397 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 TP53I13Q8NBR0 393 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 NFKBIDQ8NI38 313 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SMPDL3AQ92484 453 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 INSM2Q96T92 566 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 NKX2-4Q9H2Z4 354 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 MIEF1Q9NQG6 463 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 ALX3O95076 343 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ALOX12P18054 663 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 CCR8P51685 355 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SCARB2Q14108 478 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SYT16Q17RD7 645 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 WDR45BQ5MNZ6 344 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 IKBIPQ70UQ0 350 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 TSEN54Q7Z6J9 526 aaKnown RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 ADGRF3Q8IZF5 1079 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SVOPQ8N4V2 548 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 GANCQ8TET4 914 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ZHX1-C8orf76Q96EF9 292 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 CDCA3Q99618 268 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 TMEM246Q9BRR3 403 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ZNF717Q9BY31 904 aaPredicted RBP13.3□□□□□ -0.28
MSH5-202ENST00000375740 OR2B2Q9GZK3 357 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 OSGEPL1Q9H4B0 414 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 WASH6PQ9NQA3 447 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 MOSPD1Q9UJG1 213 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ACSL5Q9ULC5 683 aa13.3□□□□□ -0.28
MSH5-202ENST00000375740 ISPDA4D126 451 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 ICMTO60725 284 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 DNTTP04053 509 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 TNFRSF1BP20333 461 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 SOAT1P35610 550 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 SOWAHCQ53LP3 525 aaPredicted RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 Q5BKY6 102 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 ATG16L2Q8NAA4 619 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 FBLIM1Q8WUP2 373 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PROX1Q92786 737 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 UBE2FQ969M7 185 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 C12orf66Q96MD2 445 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 MS4A8Q9BY19 250 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 DCSTAMPQ9H295 470 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 RNF167Q9H6Y7 350 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 FBXL12Q9NXK8 326 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PLEKHM1Q9Y4G2 1056 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PCDHGB1Q9Y5G3 927 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 AP1M2Q9Y6Q5 423 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 K7EQS6 105 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 C9P02748 559 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 CD36P16671 472 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 BSGP35613 385 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 MAPK12P53778 367 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 MRPS15P82914 257 aaKnown RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 SYT6Q5T7P8 510 aaPredicted RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 AGAP6Q5VW22 663 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PARP16Q8N5Y8 322 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 TTC29Q8NA56 475 aaPredicted RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 ELSPBP1Q96BH3 223 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 TM4SF18Q96CE8 201 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 AGAP4Q96P64 663 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 TTYH2Q9BSA4 534 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PCBD2Q9H0N5 130 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PHPT1Q9NRX4 125 aaPredicted RBP13.29□□□□□ -0.28
MSH5-202ENST00000375740 KCNK6Q9Y257 313 aa13.29□□□□□ -0.28
MSH5-202ENST00000375740 PADI2Q9Y2J8 665 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms