RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 GPR19Q15760 415 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 SSX1Q16384 188 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF431Q8TF32 576 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 UFD1Q92890 307 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 BBS4Q96RK4 519 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 DPCDQ9BVM2 203 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 SLC12A9Q9BXP2 914 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 TEX12Q9BXU0 123 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 REEP4Q9H6H4 257 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ERP29P30040 261 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 TIA1P31483 386 aaKnown RBP eCLIP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 GALK2Q01415 458 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 POU4F3Q15319 338 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 TPRG1Q6ZUI0 275 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 OR2AP1Q8NGE2 309 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 NEIL2Q969S2 332 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 OPALINQ96PE5 141 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 SNTNA6NMZ2 147 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 A8MUA0 341 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 NUPL2O15504 423 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 OR3A3P47888 321 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF763Q0D2J5 394 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 EIF4HQ15056 248 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 FAM205BPQ63HN1 556 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 NEIL3Q8TAT5 605 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 TMEM169Q96HH4 297 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 EXTL2Q9UBQ6 330 aa13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ZFR2Q9UPR6 939 aaKnown RBP13.12□□□□□ -0.31
MCF2L-204ENST00000375608 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 B4DXG7 233 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 CD70P32970 193 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 DGKGP49619 791 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TAS2R41P59536 307 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 BNC1Q01954 994 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 FAPQ12884 760 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 RPA4Q13156 261 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 REPS1Q96D71 796 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TEFMQ96QE5 360 aaKnown RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 HHATLQ9HCP6 504 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 NDRG2Q9UN36 371 aaKnown RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PCDHGB2Q9Y5G2 931 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 LYRM1O43325 122 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PRAMEF4O60810 478 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 IDSP22304 550 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PDHA2P29803 388 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 MAGEA11P43364 429 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SLC9A3P48764 834 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF81P51508 661 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PRAMEF9Q5VWM5 478 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF730Q6ZMV8 503 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 USP50Q70EL3 339 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 OXR1Q8N573 874 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SORCS1Q8WY21 1168 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TMEM19Q96HH6 336 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 MCCC1Q96RQ3 725 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 ABCG5Q9H222 651 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 MRPL15Q9P015 296 aaKnown RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SLC25A13Q9UJS0 675 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 NEDD8-MDP1E9PL57 170 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 DHFRP00374 187 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 CSF3P09919 207 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PCGF2P35227 344 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 P2RY14Q15391 338 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 MACC1Q6ZN28 852 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 DNAJB7Q7Z6W7 309 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 CHST14Q8NCH0 376 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 ASB11Q8WXH4 323 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SIPA1Q96FS4 1042 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 TRMT61AQ96FX7 289 aaKnown RBP13.11□□□□□ -0.31
MCF2L-204ENST00000375608 PITX2Q99697 317 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 BARHL1Q9BZE3 327 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 SLA2Q9H6Q3 261 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
MCF2L-204ENST00000375608 RLFQ13129 1914 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms