RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 COMTD1Q86VU5 262 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 TEX19Q8NA77 164 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 CFL2Q9Y281 166 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 TEX264Q9Y6I9 313 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MYADML2A6NDP7 307 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 POU3F4P49335 361 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 GINS1Q14691 196 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 CYP1B1Q16678 543 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 RAB6CQ53S08 254 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 NCEH1Q6PIU2 408 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MYLIPQ8WY64 445 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 FCGR1BQ92637 280 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MFRPQ9BY79 579 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 RAB6CQ9H0N0 254 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 WASF3Q9UPY6 502 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 CAPN5O15484 640 aaPredicted RBP14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 AGR2O95994 175 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 GLP1RP43220 463 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MAGEA8P43361 318 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 OR4D2P58180 307 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 NTHL1P78549 312 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 SAMD12Q8N8I0 201 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF461Q8TAF7 563 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 KCTD13Q8WZ19 329 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 EEF1E1O43324 174 aaKnown RBP14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 LEPRP48357 1165 aaKnown RBP14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 SQSTM1Q13501 440 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 CHRFAM7AQ494W8 412 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 DPY19L4Q7Z388 723 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 UBE2Q1Q7Z7E8 422 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF649Q9BS31 505 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 OR10A4Q9H209 315 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 SSU72Q9NP77 194 aaKnown RBP14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 TAS2R10Q9NYW0 307 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 CACNA1FO60840 1977 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 SOD2P04179 222 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF30P17039 623 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MAOBP27338 520 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF763Q0D2J5 394 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF805Q5CZA5 627 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 ATAD3CQ5T2N8 411 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 C3orf33Q6P1S2 294 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 PQLC3Q8N755 202 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 RBP7Q96R05 134 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 MTG2Q9H4K7 406 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 OR2S2Q9NQN1 319 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 BACE2Q9Y5Z0 518 aa14.12□□□□□ -0.15
NOTCH4-201ENST00000375023 I3L521 148 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF35P13682 527 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CELP19835 753 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 GSTM3P21266 225 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 AK4P27144 223 aaPredicted RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PHC2Q8IXK0 858 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 SIX4Q9UIU6 781 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 DFNA5O60443 496 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 RBM34P42696 430 aaKnown RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 EPHA4P54764 986 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 TBPL1P62380 186 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 MYBPHQ13203 477 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 RPF2Q9H7B2 306 aaKnown RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ABCG2Q9UNQ0 655 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CDKN2DP55273 166 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 RPS21P63220 83 aaKnown RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CRYZQ08257 329 aaKnown RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 UPP1Q16831 310 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 DRICH1Q6PGQ1 229 aaPredicted RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ASPGQ86U10 573 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PLEKHO2Q8TD55 490 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 HSD3B7Q9H2F3 369 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 REEP4Q9H6H4 257 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 RNF6Q9Y252 685 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PFKLP17858 780 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 HNRNPKP61978 463 aaKnown RBP eCLIP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ABRAXAS2Q15018 415 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 SEC23BQ15437 767 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CDNFQ49AH0 187 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CFAP77Q6ZQR2 320 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CLEC1AQ8NC01 280 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ASB6Q9NWX5 421 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CAMK2AQ9UQM7 478 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 B3GALT1Q9Y5Z6 326 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ITGB8P26012 769 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 CDKN3Q16667 212 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 ZNF792Q3KQV3 632 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PTCRAQ6ISU1 281 aaPredicted RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 TSPAN33Q86UF1 283 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 NRROSQ86YC3 692 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 FAM86B1Q8N7N1 296 aa14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 C2CD4AQ8NCU7 369 aaPredicted RBP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.11□□□□□ -0.15
NOTCH4-201ENST00000375023 DEFB126Q9BYW3 111 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms