RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SCRN2Q96FV2 425 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 TSNAXQ99598 290 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ERVK-11Q9UQG0 969 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 IFT52Q9Y366 437 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 NPIPA5E9PKD4 350 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 SCDO00767 359 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PCDHGA12O60330 932 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 HCKP08631 526 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 HOXD8P13378 290 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PORP16435 677 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CELP19835 753 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 GINS1Q14691 196 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 C6orf136Q5SQH8 315 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF776Q68DI1 518 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CEP68Q76N32 757 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZSWIM9Q86XI8 627 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 IL12RB2Q99665 862 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ACTR6Q9GZN1 396 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 Q9N2J8 555 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PHIPQ8WWQ0 1821 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 LY75O60449 1722 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 SDHDO14521 159 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PFKLP17858 780 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 DIO3P55073 304 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 GABARAPL2P60520 117 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 RPS13P62277 151 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PPP1R3AQ16821 1122 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 FAM26DQ5JW98 314 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 LIPKQ5VXJ0 399 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 UBQLNLQ8IYU4 475 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF382Q96SR6 550 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 KCTD3Q9Y597 815 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 A0A1B0GVT2 93 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 C12orf71A8MTZ7 269 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 VILLO15195 856 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CYP17A1P05093 508 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF14P17017 642 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 AGTRAPQ6RW13 159 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 TMIGD1Q6UXZ0 262 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNN1Q92952 543 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 RNF121Q9H920 327 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 TEX13CA0A0J9YWL9 993 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 FCER2P06734 321 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 GKN3PP0CG01 181 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 DCKP27707 260 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ACTR1BP42025 376 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 BLKP51451 505 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 FXYD6P3P58550 94 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ACTR1AP61163 376 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF763Q0D2J5 394 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 LMAN2Q12907 356 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 OR51G2Q8NGK0 314 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNJ9Q92806 393 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 RTP4Q96DX8 246 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 LRIG1Q96JA1 1093 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC2A11Q9BYW1 496 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PNO1Q9NRX1 252 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ABI3Q9P2A4 366 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PADI2Q9Y2J8 665 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PCDHB14Q9Y5E9 798 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNFX1Q9P2E3 1918 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 A0A096LPI6 279 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 TGM5O43548 720 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 GSRP00390 522 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MT-ND2P03891 347 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ITPRIPL2Q3MIP1 535 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 BAIAP2L2Q6UXY1 529 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 CYS1Q717R9 158 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC39A11Q8N1S5 342 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 C3orf58Q8NDZ4 430 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC5A11Q8WWX8 675 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 RHBDF1Q96CC6 855 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MRGPRX2Q96LB1 330 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 SEC61A2Q9H9S3 476 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNIP3Q9Y2W7 256 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MEN1O00255 615 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 RFPL2O75678 378 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 CREB5Q02930 508 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 PIGFQ07326 219 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.78□□□□□ -0.524e-6■□□□□ 11.1
NPLOC4-202ENST00000374747 PLEKHN1Q494U1 663 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 GOLM1Q8NBJ4 401 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 OR8S1Q8NH09 359 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 FANK1Q8TC84 345 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 GATAD2BQ8WXI9 593 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 TMEM41AQ96HV5 264 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 RANBP9Q96S59 729 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 OR51B5Q9H339 312 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 GRHPRQ9UBQ7 328 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms