RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CRB2Q5IJ48 1285 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 TMEM26Q6ZUK4 368 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 PATL1Q86TB9 770 aaKnown RBP23.66■■□□□ 1.38
CTSA-203ENST00000372459 DEFB119Q8N690 84 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 ROGDIQ9GZN7 287 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 CHRDQ9H2X0 955 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 PILRAQ9UKJ1 303 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 GOLGA4Q13439 2230 aaKnown RBP23.66■■□□□ 1.38
CTSA-203ENST00000372459 SH3BP5O60239 455 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 ERAL1O75616 437 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 ZNF888P0CJ79 500 aaPredicted RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 NELFEP18615 380 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 TUBA4AP68366 448 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 USP51Q70EK9 711 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 SIX5Q8N196 739 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 HORMAD2Q8N7B1 307 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 CADM4Q8NFZ8 388 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 UTP15Q8TED0 518 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 C7orf34Q96L11 122 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 VNN3Q9NY84 501 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 PADI2Q9Y2J8 665 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 MYO1GB0I1T2 1018 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 TMEM229AB2RXF0 380 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 M0QX08 132 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 PGRMC2O15173 223 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 PROM1O43490 865 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 OPN1SWP03999 348 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 CD38P28907 300 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 DNAJA1P31689 397 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 ITGA1P56199 1179 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 PCBP3P57721 371 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 SUZ12Q15022 739 aaKnown RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 C18orf63Q68DL7 685 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 SLC48A1Q6P1K1 146 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 OOSP2Q86WS3 158 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 CAMKVQ8NCB2 501 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 PJA1Q8NG27 643 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 TAMM41Q96BW9 452 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 ZFYVE21Q9BQ24 234 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 SOX17Q9H6I2 414 aaPredicted RBP23.65■■□□□ 1.38
CTSA-203ENST00000372459 A4GALTQ9NPC4 353 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 ENTPD4Q9Y227 616 aa23.65■■□□□ 1.38
CTSA-203ENST00000372459 A0A0J9YY10 115 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 CCDC160A6NGH7 325 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 WASHC1A8K0Z3 465 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 DPM1O60762 260 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 CLIC3O95833 236 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 ALDH3B2P48448 385 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 REEP3Q6NUK4 255 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 TNFAIP8L2Q6P589 184 aaPredicted RBP23.64■■□□□ 1.38
CTSA-203ENST00000372459 TTC33Q6PID6 262 aaPredicted RBP23.64■■□□□ 1.38
CTSA-203ENST00000372459 ARL10Q8N8L6 244 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 BAHD1Q8TBE0 780 aaPredicted RBP23.64■■□□□ 1.38
CTSA-203ENST00000372459 SPPL2AQ8TCT8 520 aa23.64■■□□□ 1.38
CTSA-203ENST00000372459 A0A1W2PR77 199 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 B4DGG1 531 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 HS6ST1O60243 411 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 DIRAS1O95057 198 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 WNT1P04628 370 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 FPR1P21462 350 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 RPS26P62854 115 aaKnown RBP23.63■■□□□ 1.37
CTSA-203ENST00000372459 TP53BP2Q13625 1128 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 IFI44LQ53G44 452 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 RERGQ96A58 199 aaPredicted RBP23.63■■□□□ 1.37
CTSA-203ENST00000372459 MAPKAP1Q9BPZ7 522 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 KLHL25Q9H0H3 589 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 GABARAPL1Q9H0R8 117 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 TOR3AQ9H497 397 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 CLK4Q9HAZ1 481 aaKnown RBP23.63■■□□□ 1.37
CTSA-203ENST00000372459 GIMAP4Q9NUV9 329 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 C3orf18Q9UK00 162 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 CES1P1Q9UKY3 287 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 C5orf58C9J3I9 102 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 B4GALT2O60909 372 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 CSF2P04141 144 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 PRKACGP22612 351 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 ELOCQ15369 112 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 RFX4Q33E94 735 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 IQCCQ4KMZ1 466 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 TTC23Q5W5X9 447 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 Q7L0L9 218 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 IQCHQ86VS3 1027 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 OFCC1Q8IZS5 231 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 SPEM1Q8N4L4 309 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 NRBF2Q96F24 287 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 REEP1Q9H902 201 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 SEMA3GQ9NS98 782 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 EVA1BQ9NVM1 165 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 THUMPD1Q9NXG2 353 aaKnown RBP23.63■■□□□ 1.37
CTSA-203ENST00000372459 ORC6Q9Y5N6 252 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 CEPT1Q9Y6K0 416 aa23.63■■□□□ 1.37
CTSA-203ENST00000372459 A0A1B0GTW7 788 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 OR5K3A6NET4 321 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 P2RX6O15547 441 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 SMIM10L1P0DMW3 83 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 LSSP48449 732 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 RACK1P63244 317 aaKnown RBP23.62■■□□□ 1.37
CTSA-203ENST00000372459 KCTD21Q4G0X4 260 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 TMEM64Q6YI46 380 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 ZNF555Q8NEP9 628 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms