RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ERVPABLB-1P60509 514 aa18.82■□□□□ 0.6
LMO4-202ENST00000370544 ZNF615Q8N8J6 731 aa18.82■□□□□ 0.6
LMO4-202ENST00000370544 CPNE2Q96FN4 548 aaPredicted RBP18.82■□□□□ 0.6
LMO4-202ENST00000370544 DHRS1Q96LJ7 313 aa18.82■□□□□ 0.6
LMO4-202ENST00000370544 SCGB3A2Q96PL1 93 aa18.82■□□□□ 0.6
LMO4-202ENST00000370544 ADAMTS6Q9UKP5 1117 aa18.82■□□□□ 0.6
LMO4-202ENST00000370544 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 COQ5Q5HYK3 327 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 CES4AQ5XG92 561 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 TMPRSS9Q7Z410 1059 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.81■□□□□ 0.6
LMO4-202ENST00000370544 OR8K5Q8NH50 307 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 NSMAFQ92636 917 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 MED11Q9P086 117 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 CDH10Q9Y6N8 788 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 C11orf98E9PRG8 122 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 NNATQ16517 81 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 ANKDD1AQ495B1 522 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 RPL13AP3Q6NVV1 102 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 GPAT4Q86UL3 456 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 SLC30A2Q9BRI3 323 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 TRPV4Q9HBA0 871 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 ZNF224Q9NZL3 707 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 SLC9A3P48764 834 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 SLC36A3Q495N2 470 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 PLCZ1Q86YW0 608 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 LINC00597Q9H2U6 94 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 MAGIXQ9H6Y5 334 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 ACSL6Q9UKU0 697 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 PLCL2Q9UPR0 1127 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 NPIPB15A6NHN6 443 aaPredicted RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 KCNJ13O60928 360 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 PORP16435 677 aaPredicted RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 GALNT1Q10472 559 aaPredicted RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 DAZLQ92904 295 aaKnown RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 MNTQ99583 582 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 SOX17Q9H6I2 414 aaPredicted RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 FANCFQ9NPI8 374 aa18.81■□□□□ 0.6
LMO4-202ENST00000370544 FBXO9Q9UK97 447 aaPredicted RBP18.81■□□□□ 0.6
LMO4-202ENST00000370544 OR2B3O76000 313 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 PRH1P02810 166 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 RHCEP18577 417 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 RAB28P51157 221 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 CEBPGP53567 150 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 SEC23BQ15437 767 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 KDELC1Q6UW63 502 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 PAQR7Q86WK9 346 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 C3orf58Q8NDZ4 430 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 GPR150Q8NGU9 434 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 THRSPQ92748 146 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 FBXL8Q96CD0 374 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 LIN28AQ9H9Z2 209 aaKnown RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 SMIM30A4D0T7 59 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 CLEC3AO75596 197 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 IL33O95760 270 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 C7P10643 843 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 EPCAMP16422 314 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 PRKCDQ05655 676 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 RCAN2Q14206 197 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 UGT3A2Q3SY77 523 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 KIAA1143Q96AT1 154 aaPredicted RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 PRR11Q96HE9 360 aaPredicted RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 HSPA12BQ96MM6 686 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 ZNF717Q9BY31 904 aaPredicted RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 ZNF451Q9Y4E5 1061 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 TMEM189-UBE2V1I3L0A0 370 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 J3QRK9 145 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 LRIT3Q3SXY7 679 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 C16orf78Q8WTQ4 265 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 ASB6Q9NWX5 421 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 STOX2Q9P2F5 926 aaPredicted RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 MKLN1Q9UL63 735 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 CCRL2O00421 344 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 MAD2L1BPQ15013 274 aaPredicted RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 GRHL2Q6ISB3 625 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 MSANTD1Q6ZTZ1 278 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 OR4C15Q8NGM1 316 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 SGCDQ92629 289 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 S100A16Q96FQ6 103 aaKnown RBP18.8■□□□□ 0.6
LMO4-202ENST00000370544 TMEM184CQ9NVA4 438 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 PCDHGB6Q9Y5F9 930 aa18.8■□□□□ 0.6
LMO4-202ENST00000370544 SPARCP09486 303 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 GPR143P51810 404 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 CLCA4Q14CN2 919 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 ZNF789Q5FWF6 425 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 C1orf94Q6P1W5 598 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 CLECL1Q8IZS7 167 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 SLC39A11Q8N1S5 342 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 CD200R1Q8TD46 325 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 ZDHHC7Q9NXF8 308 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 GGT1P19440 569 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 ENDOUP21128 410 aaKnown RBP18.79■□□□□ 0.6
LMO4-202ENST00000370544 HTR6P50406 440 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 MAZP56270 477 aaKnown RBP18.79■□□□□ 0.6
LMO4-202ENST00000370544 TAS2R38P59533 333 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 MOGQ16653 247 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 TMEM225Q6GV28 225 aa18.79■□□□□ 0.6
LMO4-202ENST00000370544 THOC7Q6I9Y2 204 aaKnown RBP18.79■□□□□ 0.6
LMO4-202ENST00000370544 SLC22A16Q86VW1 577 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms