RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 F2P00734 622 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 ALDOCP09972 364 aaKnown RBP15.27■□□□□ 0.03
COL17A1-202ENST00000369733 PRDX3P30048 256 aaKnown RBP15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CCL14Q16627 93 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 GFOD2Q3B7J2 385 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 SPRED1Q7Z699 444 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CPA6Q8N4T0 437 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 JAGN1Q8N5M9 183 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 DBF4BQ8NFT6 615 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 IL12BP29460 328 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 ZXDBP98169 803 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 GPR17Q13304 367 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 DOC2AQ14183 400 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 RGMBQ6NW40 437 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 UBQLNLQ8IYU4 475 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 OR9Q2Q8NGE9 314 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 LILRB4Q8NHJ6 448 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 RELTQ969Z4 430 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 TAPBPLQ9BX59 468 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CACNG6Q9BXT2 260 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF350Q9GZX5 532 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 ARL6Q9H0F7 186 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 MTG2Q9H4K7 406 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CUEDC1Q9NWM3 386 aaPredicted RBP15.27■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM5Q9Y2B1 443 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 A8MU76 341 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 NARSO43776 548 aaKnown RBP15.26■□□□□ 0.03
COL17A1-202ENST00000369733 RPS17P08708 135 aaKnown RBP15.26■□□□□ 0.03
COL17A1-202ENST00000369733 LAMP1P11279 417 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 RPS26P62854 115 aaKnown RBP15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ARFRP1Q13795 201 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 BAIAP2L2Q6UXY1 529 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF534Q76KX8 674 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 KCTD9Q7L273 389 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 EPYCQ99645 322 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ACOT13Q9NPJ3 140 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 WDR45Q9Y484 360 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 JRKO75564 520 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 CAPNS1P04632 268 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 S100A10P60903 97 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 TAZQ16635 292 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 FOXB2Q5VYV0 432 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 FOXRED2Q8IWF2 684 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 NXPE2Q96DL1 559 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 MEIOCA2RUB1 952 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 HMX3A6NHT5 357 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 SOCS5O75159 536 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 C8AP07357 584 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 RAB8AP61006 207 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 GDPGP1Q6ZNW5 385 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 LRRTM4Q86VH4 590 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 THEM6Q8WUY1 208 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 APIPQ96GX9 242 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 SCP2D1Q9UJQ7 156 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ARNTLO00327 626 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 C1GALT1C1LP0DN25 315 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF20P17024 532 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 CD9P21926 228 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 SOX3P41225 446 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 CXCR4P61073 352 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 ENPP2Q13822 863 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 FAAH2Q6GMR7 532 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 DLK2Q6UY11 383 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 HMGN2P46Q86SG4 172 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 OR13F1Q8NGS4 319 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 KLK6Q92876 244 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 PGAP3Q96FM1 320 aaPredicted RBP15.26■□□□□ 0.03
COL17A1-202ENST00000369733 C16orf70Q9BSU1 422 aa15.26■□□□□ 0.03
COL17A1-202ENST00000369733 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ALPLP05186 524 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ALAS2P22557 587 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 PRKACBP22694 351 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 FGFBP1Q14512 234 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM69Q5SWH9 247 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ABHD13Q7L211 337 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 FBXO15Q8NCQ5 510 aaPredicted RBP15.25■□□□□ 0.03
COL17A1-202ENST00000369733 SLC25A36Q96CQ1 311 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 TCEAL4Q96EI5 215 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CDH7Q9ULB5 785 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 SH2B3Q9UQQ2 575 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 DISC1C4P0D8 188 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ACOT8O14734 319 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CDK1P06493 297 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 OSMP13725 252 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 PTPN2P17706 415 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 GGT2P36268 569 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ALDH3B2P48448 385 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 RING1Q06587 406 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CES4AQ5XG92 561 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 NUP54Q7Z3B4 507 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CMTM8Q8IZV2 173 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 FBXL3Q9UKT7 428 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 MMP20O60882 483 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 S100A2P29034 98 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 MTNR1AP48039 350 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 SNAP47Q5SQN1 464 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CNTN4Q8IWV2 1026 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms