RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 FXNQ16595 210 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 PRSS42Q7Z5A4 293 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 ARHGEF39Q8N4T4 335 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 ZFP28Q8NHY6 868 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 DNAJC9Q8WXX5 260 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 NCLNQ969V3 563 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 CNRIP1Q96F85 164 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 REXO5Q96IC2 774 aaKnown RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 GLIPR2Q9H4G4 154 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 RPF2Q9H7B2 306 aaKnown RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 CES1P1Q9UKY3 287 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 ZNF780BQ9Y6R6 833 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 A0A0A6YYC8 382 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 RNF103-CHMP3A0A140T963 221 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 TCRBV3S1A0A5B6 114 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 HYKKA2RU49 373 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 AQP12BA6NM10 295 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 TMEM150CB9EJG8 249 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 I3L1I5 382 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 GGT1P19440 569 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 UQCRC2P22695 453 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 FEN1P39748 380 aaKnown RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 CASP9P55211 416 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 CCL7P80098 99 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 SHC2P98077 582 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 SLC34A1Q06495 639 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 GPR19Q15760 415 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 ZNF750Q32MQ0 723 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 SPDYE7PQ495Y7 208 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 OR52E8Q6IFG1 317 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 TMEM71Q6P5X7 295 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 GPR155Q7Z3F1 870 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 AQP12AQ8IXF9 295 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 TTC29Q8NA56 475 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 IFI44Q8TCB0 444 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 NSMCE2Q96MF7 247 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 ZNF285Q96NJ3 590 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 AMDHD1Q96NU7 426 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 SH3GL3Q99963 347 aa18.35■□□□□ 0.53
CHTOP-204ENST00000368694 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-204ENST00000368694 CPNE6O95741 557 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CRATP43155 626 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CDK9P50750 372 aaKnown RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 GZMMP51124 257 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 SIM1P81133 766 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 RGNQ15493 299 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 TMTC4Q5T4D3 741 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CCDC116Q8IYX3 515 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 SPRTNQ9H040 489 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 C11orf16Q9NQ32 467 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 STOML1Q9UBI4 398 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 RAPGEFL1Q9UHV5 662 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 ADAMTS20P59510 1910 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 H3BNX3 289 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 OR2B3O76000 313 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CKMT1AP12532 417 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CSNK2A2P19784 350 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 MLC1Q15049 377 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 SZRD1Q7Z422 152 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 KMT5CQ86Y97 462 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 CA13Q8N1Q1 262 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 D2HGDHQ8N465 521 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 NPLQ9BXD5 320 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-204ENST00000368694 TRIM4Q9C037 500 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 MAP4K5Q9Y4K4 846 aa18.34■□□□□ 0.53
CHTOP-204ENST00000368694 A0A1W2PQM1 296 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 A0A1W2PS29 197 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 DPPA5A6NC42 116 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 CXCR6O00574 342 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 AHCYL1O43865 530 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 MED26O95402 600 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 KRT75O95678 551 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 PSMA4P25789 261 aaKnown RBP18.33■□□□□ 0.52
CHTOP-204ENST00000368694 MPIP34949 423 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 POLE2P56282 527 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 MAP7Q14244 749 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 GRM7Q14831 915 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 GARNL3Q5VVW2 1013 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 TMPRSS9Q7Z410 1059 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 RNF130Q86XS8 419 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 FAM162AQ96A26 154 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 SLC41A2Q96JW4 573 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 LRRN3Q9H3W5 708 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 ZNF768Q9H5H4 540 aaKnown RBP18.33■□□□□ 0.52
CHTOP-204ENST00000368694 SIRT3Q9NTG7 399 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-204ENST00000368694 SEMA5BQ9P283 1151 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 GMEB1Q9Y692 573 aa18.33■□□□□ 0.52
CHTOP-204ENST00000368694 DHRS12A0PJE2 317 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 LNP1A1A4G5 178 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 ENO4A6NNW6 628 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 MYO1GB0I1T2 1018 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 KCNK5O95279 499 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 FESP07332 822 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 NELFEP18615 380 aaKnown RBP18.32■□□□□ 0.52
CHTOP-204ENST00000368694 PTGER1P34995 402 aa18.32■□□□□ 0.52
CHTOP-204ENST00000368694 DUSP3P51452 185 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-204ENST00000368694 FAM53BQ14153 422 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms