RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 THBS4P35443 961 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 GPD2P43304 727 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 DGKQP52824 942 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 COPB1P53618 953 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 HNRNPH2P55795 449 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 STX5Q13190 355 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 MVPQ14764 893 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 MOGAT2Q3SYC2 334 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF789Q5FWF6 425 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 BEX5Q5H9J7 111 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 PLPP4Q5VZY2 271 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CES5AQ6NT32 575 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CDC73Q6P1J9 531 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 TTC33Q6PID6 262 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 C16orf89Q6UX73 402 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 IL20RBQ6UXL0 311 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CLEC17AQ6ZS10 378 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 UBE2J2Q8N2K1 259 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 L3MBTL4Q8NA19 623 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 UXS1Q8NBZ7 420 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 TMEM116Q8NCL8 245 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SRFBP1Q8NEF9 429 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 EXD1Q8NHP7 514 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC2A14Q8TDB8 520 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RNASE8Q8TDE3 154 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 XAGE5Q8WWM1 108 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 NPIPB3Q92617 1050 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 MCUR1Q96AQ8 359 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 HAVCR1Q96D42 359 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ELP4Q96EB1 424 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 OXNAD1Q96HP4 312 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZFYVE19Q96K21 471 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF514Q96K75 400 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF558Q96NG5 402 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 KLHL5Q96PQ7 755 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 PCDHB18PQ96TA0 734 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF577Q9BSK1 485 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 WACQ9BTA9 647 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 DPCDQ9BVM2 203 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 DDX47Q9H0S4 455 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 DNTTIP1Q9H147 329 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 OSGEPL1Q9H4B0 414 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RIOX1Q9H6W3 641 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 METTL8Q9H825 291 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC40A1Q9NP59 571 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 TUBG2Q9NRH3 451 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RHBDL2Q9NX52 303 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 WSB2Q9NYS7 404 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 PDP1Q9P0J1 537 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 FBXL17Q9UF56 701 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNHIT2Q9UHR6 403 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 HAO1Q9UJM8 370 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 GGA2Q9UJY4 613 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 AP3M1Q9Y2T2 418 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 GDAQ9Y2T3 454 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.81□□□□□ -1.641e-7■■■■■ 27.3
ECHDC1-204ENST00000368292 PTPRQQ9UMZ3 2332 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 FBN3Q75N90 2809 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SPAG17Q6Q759 2223 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 A0A087WV48 116 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 GSTTP1A0A1W2PQM5 241 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TYW5A2RUC4 315 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 HAS3O00219 553 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 MDM4O15151 490 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CLIC2O15247 247 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SMIM24O75264 130 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 NUDT3O95989 172 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 UGT2B4P06133 528 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC166P0CW27 439 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PEPDP12955 493 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ADRA2CP18825 462 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 M6PRP20645 277 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CCNOP22674 350 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 UCP1P25874 307 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PKLRP30613 574 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 HMGCLP35914 325 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 GRIA3P42263 894 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC1A4P43007 532 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 BCAP31P51572 246 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CACNA2D1P54289 1103 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 RPL15P61313 204 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 UFM1P61960 85 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TIMM10P62072 90 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 E2F1Q01094 437 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 GALK2Q01415 458 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 LRRC63Q05C16 580 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 ILF2Q12905 390 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 DYNC1I2Q13409 638 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 PIGHQ14442 188 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TSC22D1Q15714 1073 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 UAP1Q16222 522 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 SSX2Q16385 188 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 CDONQ4KMG0 1287 aa4.8□□□□□ -1.64
ECHDC1-204ENST00000368292 XKR4Q5GH76 650 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms