RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PCM1Q15154 2024 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 M0R129 80 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ARHGAP33O14559 1287 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 KIAA0513O60268 411 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 TIMP1P01033 207 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 H1F0P07305 194 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 ADRB3P13945 408 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 CD72P21854 359 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 TIE1P35590 1138 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 KCNJ5P48544 419 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 LIM2P55344 173 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 PCBP4P57723 403 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 ERVFC1P60507 584 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 TRA2BP62995 288 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 REEP5Q00765 189 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ALDH6A1Q02252 535 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 CD300CQ08708 224 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 MLC1Q15049 377 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 MED22Q15528 200 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ADAMTSL4Q6UY14 1074 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 C11orf96Q7Z7L8 435 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ADGRF3Q8IZF5 1079 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 CYP4Z2PQ8N1L4 340 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 LINC00471Q8N535 108 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ZNF366Q8N895 744 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 SMPDL3AQ92484 453 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ZBED6CLQ96FA7 236 aaPredicted RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 OR5M11Q96RB7 305 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 ACAD8Q9UKU7 415 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 TRAPPC4Q9Y296 219 aa13.58□□□□□ -0.23
CD48-201ENST00000368045 LSM2Q9Y333 95 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 RPL36Q9Y3U8 105 aaKnown RBP13.58□□□□□ -0.23
CD48-201ENST00000368045 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 HIDE1A8MVS5 230 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 ENTPD6O75354 484 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 POU1F1P28069 291 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 CCR8P51685 355 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 CYP4F2P78329 520 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 SLC13A2Q13183 592 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 OCLNQ16625 522 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 TCTN3Q6NUS6 607 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 TNFAIP8L2Q6P589 184 aaPredicted RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 FAM83HQ6ZRV2 1179 aaPredicted RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 ERN2Q76MJ5 926 aaKnown RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 C6orf120Q7Z4R8 191 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 MMP21Q8N119 569 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 SCAIQ8N9R8 606 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 LMNTD1Q8N9Z9 388 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 OR8J1Q8NGP2 316 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 COX14Q96I36 57 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 ZSWIM3Q96MP5 696 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 IL17FQ96PD4 163 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 OPALINQ96PE5 141 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 SORBS1Q9BX66 1292 aaKnown RBP13.58□□□□□ -0.24
CD48-201ENST00000368045 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 SLAMF7Q9NQ25 335 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 TAS2R7Q9NYW3 318 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 RHCGQ9UBD6 479 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 SEC14L4Q9UDX3 406 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
CD48-201ENST00000368045 TRIM43BA6NCK2 446 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 PDZK1P1A8MUH7 402 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 SNPHO15079 494 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 SH3BP5O60239 455 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 DLGAP3O95886 979 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 TBX6O95947 436 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 APOA1P02647 267 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 ALOX12P18054 663 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 CRISP3P54108 245 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 COX10Q12887 443 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 SELENBP1Q13228 472 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 SSX1Q16384 188 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 RPS26P11Q5JNZ5 115 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 SLC25A30Q5SVS4 291 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 CD300LDQ6UXZ3 194 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 AKAP14Q86UN6 197 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 HEATR4Q86WZ0 1026 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 NUDT13Q86X67 352 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 FAM83FQ8NEG4 500 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 ST13P5Q8NFI4 369 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 OR5AR1Q8NGP9 310 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 TFGQ92734 400 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 RGMAQ96B86 450 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 FUZQ9BT04 418 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 MND1Q9BWT6 205 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 ROGDIQ9GZN7 287 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms