RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 GABPB2Q8TAK5 448 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 CD200R1Q8TD46 325 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 ZNF721Q8TF20 911 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 ALG3Q92685 438 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 ABTB1Q969K4 478 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 SNF8Q96H20 258 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 RUNDC3BQ96NL0 473 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 AMFRQ9UKV5 643 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 MRPS33Q9Y291 106 aaKnown RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 PKD1L1Q8TDX9 2849 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 CYR61O00622 381 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ETHE1O95571 254 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 APRTP07741 180 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 FBXO45P0C2W1 286 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 RPL22P35268 128 aaKnown RBP13.33□□□□□ -0.28
VAMP4-202ENST00000367740 UGT2B10P36537 528 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ACVR1BP36896 505 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 NAGLUP54802 743 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ZNF704Q6ZNC4 412 aaPredicted RBP13.33□□□□□ -0.28
VAMP4-202ENST00000367740 DNM1P46Q6ZS02 220 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 DND1Q8IYX4 353 aaKnown RBP13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 TRPV3Q8NET8 790 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 KCNJ9Q92806 393 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 NPLQ9BXD5 320 aaPredicted RBP13.33□□□□□ -0.28
VAMP4-202ENST00000367740 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 CLCF1Q9UBD9 225 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 COPS7AQ9UBW8 275 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 C15orf41Q9Y2V0 281 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 DHRS7Q9Y394 339 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 DYSFO75923 2080 aa13.33□□□□□ -0.28
VAMP4-202ENST00000367740 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-202ENST00000367740 A0A1W2PNV4 684 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 GPRIN2O60269 458 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 PLAUP00749 431 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 SERPINA6P08185 405 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 IDUAP35475 653 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 RWDD2BP57060 319 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 OCRLQ01968 901 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 KLF1Q13351 362 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-202ENST00000367740 GAB1Q13480 694 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 BICRALQ6AI39 1079 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 ZNF549Q6P9A3 640 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 ZNF474Q6S9Z5 364 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-202ENST00000367740 CILP2Q8IUL8 1156 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 SLC15A4Q8N697 577 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 WNT2BQ93097 391 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 GNRHR2Q96P88 292 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 UCN2Q96RP3 112 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 GPR21Q99679 349 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 IL22Q9GZX6 179 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 SLCO5A1Q9H2Y9 848 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
VAMP4-202ENST00000367740 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 GOLGA6L9A6NEM1 432 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 LRRC14BA6NHZ5 514 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 OVOL3O00110 214 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 HS3ST1O14792 307 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 CTNSO60931 367 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
VAMP4-202ENST00000367740 CPN1P15169 458 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 TNNI3P19429 210 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 SAT1P21673 171 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 HNRNPH1P31943 449 aaKnown RBP13.31□□□□□ -0.28
VAMP4-202ENST00000367740 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
VAMP4-202ENST00000367740 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
VAMP4-202ENST00000367740 NTRK2Q16620 822 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 TBCELQ5QJ74 424 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 PRUNE1Q86TP1 453 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 SLC5A11Q8WWX8 675 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 DIO2Q92813 273 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 FAR2Q96K12 515 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 RILPQ96NA2 401 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 QRFPRQ96P65 431 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 PARVBQ9HBI1 364 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 INTS10Q9NVR2 710 aaKnown RBP13.31□□□□□ -0.28
VAMP4-202ENST00000367740 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
VAMP4-202ENST00000367740 H0Y3Z8 333 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 EIF3FO00303 357 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 ERI3O43414 337 aaKnown RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 B3GALT2O43825 422 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 ADAM11O75078 769 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms