RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PCNX2A6NKB5 2137 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 NRP1O14786 923 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 C15orf52Q6ZUT6 534 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF283Q8N7M2 679 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CPXM1Q96SM3 734 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 PELOQ9BRX2 385 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 NTMT1Q9BV86 223 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC38A1Q9H2H9 487 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 MINDY3Q9H8M7 445 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 GPN2Q9H9Y4 310 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 RUVBL1Q9Y265 456 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM127O75204 238 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC10A3P09131 477 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR1J4Q8NGS1 313 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 MUL1Q969V5 352 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 RPL10LQ96L21 214 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 NECAB3Q96P71 396 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CERS4Q9HA82 394 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARHGEF4Q9NR80 690 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 LOC105369274A0A096LPK9 316 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 TLX2O43763 284 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 FMO6PO60774 539 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 STATHP02808 62 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 DUSP4Q13115 394 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC6A19Q695T7 634 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR4N4Q8N0Y3 316 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 TRMT61BQ9BVS5 477 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 FN3KQ9H479 309 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CD84Q9UIB8 345 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 RGPD2P0DJD1 1756 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 GLYATL1P3A0A0U1RQE8 302 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 B3GALT2O43825 422 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 HYAL2Q12891 473 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 AVL9Q8NBF6 648 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 BSCL2Q96G97 398 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 GTF2F2P13984 249 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARHGAP11BQ3KRB8 267 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 NRROSQ86YC3 692 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 GJD3Q8N144 294 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR4K2Q8NGD2 314 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 HINT2Q9BX68 163 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 BTBD1Q9H0C5 482 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SIX2Q9NPC8 291 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 WASF3Q9UPY6 502 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 PARP4Q9UKK3 1724 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SHOXO15266 292 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TGFB3P10600 412 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 NBPF12Q5TAG4 269 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 INTS6Q9UL03 887 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ESR1P03372 595 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 OXA1LQ15070 435 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CYBRD1Q53TN4 286 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM86AQ8N2M4 240 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 RADILQ96JH8 1075 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 SULT4A1Q9BR01 284 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF670Q9BS34 389 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ERCC6L2Q5T890 1561 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 SRPRAP08240 638 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CHRNA4P43681 627 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 NANOGP8Q6NSW7 305 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TNFAIP8L2Q6P589 184 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARL14Q8N4G2 192 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 KRTCAP2Q8N6L1 136 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 NPRL2Q8WTW4 380 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CNOT9Q92600 299 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 SAT2Q96F10 170 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CDK15Q96Q40 435 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 DPH2Q9BQC3 489 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 HRH4Q9H3N8 390 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TNFRSF10DQ9UBN6 386 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 PTBP3O95758 552 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ADRB1P08588 477 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CREMQ03060 361 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 DCST2Q5T1A1 773 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 TBL1XR1Q9BZK7 514 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 EDNRAP25101 427 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 AQP2P41181 271 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 RAB8AP61006 207 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 A0A0G2JN53 185 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ACPPP15309 386 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 RAB6AP20340 208 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 PCBP1Q15365 356 aaKnown RBP eCLIP10.65□□□□□ -0.73e-16■■■■■ 75.2
CDC42BPA-205ENST00000366769 GSG1LQ6UXU4 331 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ADAD1Q96M93 576 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 VWA7Q9Y334 891 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 DISP2A7MBM2 1401 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR2AG2A6NM03 316 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 SREBF1P36956 1147 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 CTBP2P56545 445 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 SELENOVP59797 346 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR51E2Q9H255 320 aa10.65□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF282Q9UDV7 671 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms