RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RBP1P09455 135 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SBK3P0C264 359 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 COL6A2P12110 1019 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PRF1P14222 555 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SOX3P41225 446 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PIK3CGP48736 1102 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SERPINB9P50453 376 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CASP6P55212 293 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TNFRSF17Q02223 184 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DDX39BQ13838 428 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CDSNQ15517 529 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CPSF6Q16630 551 aaKnown RBP eCLIP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF630Q2M218 657 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 XKRXQ6PP77 449 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR4N5Q8IXE1 308 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PSD4Q8NDX1 1056 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR52B6Q8NGF0 335 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 REPS1Q96D71 796 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SENP5Q96HI0 755 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DMRTA2Q96SC8 542 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR8D2Q9GZM6 311 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RPF2Q9H7B2 306 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NOL11Q9H8H0 719 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZBTB26Q9HCK0 441 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CPSF2Q9P2I0 782 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PCTPQ9UKL6 214 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HRH3Q9Y5N1 445 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CSMD2Q7Z408 3487 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A0A1W2PR48 441 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 WASHC1A8K0Z3 465 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A8MVJ9 347 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HRKO00198 91 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HNRNPRO43390 633 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HS6ST1O60243 411 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PRKRAO75569 313 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CLDN9O95484 217 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TUBB4AP04350 444 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 INHBAP08476 426 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CNTFP26441 200 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GCAP28676 217 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RFC3P40938 356 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NR0B1P51843 470 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NEK2P51955 445 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GPR85P60893 370 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FOLH1Q04609 750 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 IL20RBQ6UXL0 311 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR52N2Q8NGI0 321 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR5L2Q8NGL0 311 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NUBPLQ8TB37 319 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PHF10Q8WUB8 498 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ASB15Q8WXK1 588 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 IFT81Q8WYA0 676 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PPWD1Q96BP3 646 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PHF21BQ96EK2 531 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SCYL1Q96KG9 808 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 C1QTNF3Q9BXJ4 246 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SH2D2AQ9NP31 389 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HPF1Q9NWY4 346 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PHF11Q9UIL8 331 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TMCO1Q9UM00 188 aa12.66□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A0A1B0GTH9 108 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A0A1B0GTL3 188 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 E9PLN8 166 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 KRT38O76015 456 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NADKO95544 446 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GPR75O95800 540 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FAM58BPP0C7Q3 252 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CTAGE8P0CG41 777 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TNNI3P19429 210 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GALNSP34059 522 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TRAF3Q13114 568 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SPRED3Q2MJR0 410 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF750Q32MQ0 723 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GGTA1PQ4G0N0 100 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NCCRP1Q6ZVX7 275 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MYLK4Q86YV6 388 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CTAGE4Q8IX94 777 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ST13P4Q8IZP2 240 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GOLM1Q8NBJ4 401 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR2M7Q8NG81 312 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FAM57AQ8TBR7 257 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF592Q92610 1267 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 UCN3Q969E3 161 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms