RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 KLHL3Q9UH77 587 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 CORO2BQ9UQ03 480 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 WBP11Q9Y2W2 641 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 HEBP2Q9Y5Z4 205 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 MAN1A2O60476 641 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 BCL10O95999 233 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 B3GALT4O96024 378 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ENGP17813 658 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 BLKP51451 505 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ARSFP54793 590 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 TPD52P55327 224 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 PDE7AQ13946 482 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 TEAD4Q15561 434 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 IKBIPQ70UQ0 350 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 BTLAQ7Z6A9 289 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 OR2L8Q8NGY9 312 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF639Q9UID6 485 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 BTBD3Q9Y2F9 522 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 UPK1AO00322 258 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 PRSS23O95084 383 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 CPSF4O95639 269 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 PKLRP30613 574 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 TTKP33981 857 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 MEP1AQ16819 746 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 FAM71E1Q6IPT2 247 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 GPR155Q7Z3F1 870 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 SNX29P2Q8IUI4 249 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 GPBAR1Q8TDU6 330 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 LMX1AQ8TE12 382 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 TAMM41Q96BW9 452 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 TOR3AQ9H497 397 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 UCKL1Q9NWZ5 548 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 TAAR2Q9P1P5 351 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 EXO1Q9UQ84 846 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 PCM1Q15154 2024 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 YY2O15391 372 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 UBL4AP11441 157 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 KRT33BQ14525 404 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 MOGQ16653 247 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 CPZQ66K79 652 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 FAM20CQ8IXL6 584 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 CLECL1Q8IZS7 167 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 EID3Q8N140 333 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 LINC01555Q8NAE3 123 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 GOT1L1Q8NHS2 421 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 GSDMCQ9BYG8 508 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF282Q9UDV7 671 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-201ENST00000359867 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 CPNE6O95741 557 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 FURINP09958 794 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 THRBP10828 461 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 AGXTP21549 392 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 CTSKP43235 329 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 IFITM2Q01629 132 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PRDX1Q06830 199 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 DAG1Q14118 895 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 SPCS2Q15005 226 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 BROXQ5VW32 411 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 KHDRBS2Q5VWX1 349 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 CADM3Q8N126 398 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PARP8Q8N3A8 854 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 OR2I1PQ8NGU4 316 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 MS4A8Q9BY19 250 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 SUSD2Q9UGT4 822 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 ERVK-11Q9UQG0 969 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 KLHL18O94889 574 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 KLK1P06870 262 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PIGAP37287 484 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 GSTM5P46439 218 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 C2orf80Q0P641 193 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 RPE65Q16518 533 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 NKG7Q16617 165 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 WASH2PQ6VEQ5 465 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PAGE2Q7Z2X7 111 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 C10orf111Q8N326 155 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 NETO1Q8TDF5 533 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 NCLNQ969V3 563 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PPCDCQ96CD2 204 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 SLC47A1Q96FL8 570 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 QRFPRQ96P65 431 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 TPT1P8Q9HAU6 139 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms