RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OARD1Q9Y530 152 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF705EA8MWA4 302 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 MLLT6P55198 1093 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 KIAA1143Q96AT1 154 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 PGAM5Q96HS1 289 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 TREX2Q9BQ50 279 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 TAS2R3Q9NYW6 316 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 HTRA2O43464 458 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 MSL3P1P0C860 447 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 AMY2BP19961 511 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 PLCXD2Q0VAA5 305 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 AADACL4Q5VUY2 407 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 LIPJQ5W064 366 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 ZDHHC12Q96GR4 267 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 CLEC4EQ9ULY5 219 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 DNMT3AQ9Y6K1 912 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 SLIT2O94813 1529 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF850A8MQ14 1090 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 FAM227AF5H4B4 570 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 TSPAN6O43657 245 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 DNAJB1P25685 340 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 MEDAGQ5VYS4 303 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 CENPSQ8N2Z9 138 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 ISOC1Q96CN7 298 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 COCHO43405 550 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 NANOGP8Q6NSW7 305 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 OR2T33Q8NG76 320 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 OR56A3Q8NH54 315 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 NEDD4LQ96PU5 975 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 PIP5K1AQ99755 562 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 SOX17Q9H6I2 414 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 NANOGQ9H9S0 305 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 SRA1Q9HD15 236 aaKnown RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 REV1Q9UBZ9 1251 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 SEC14L4Q9UDX3 406 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 PRODH2Q9UF12 536 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 UBQLN2Q9UHD9 624 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 BORCS7-ASMTA0A0B4J1R7 106 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 GALK2Q01415 458 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 GALNT6Q8NCL4 622 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 BRI3BPQ8WY22 251 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 TMEM234Q8WY98 164 aa17.64■□□□□ 0.41
SHANK1-202ENST00000359082 SECISBP2Q96T21 854 aaKnown RBP17.64■□□□□ 0.41
SHANK1-202ENST00000359082 RGS9O75916 674 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ACVR1BP36896 505 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF280AP59817 542 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 HMBOX1Q6NT76 420 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 TIFABQ6ZNK6 161 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 NLGN4XQ8N0W4 816 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 C16orf58Q96GQ5 468 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 RGCCQ9H4X1 137 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PREBQ9HCU5 417 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 BACE2Q9Y5Z0 518 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 FAAHO00519 579 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 HRGP04196 525 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ASGR2P07307 311 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PRKCAP17252 672 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 AK4P27144 223 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 GSTM2P28161 218 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 DPP6P42658 865 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 SHQ1Q6PI26 577 aaKnown RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PQLC3Q8N755 202 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 OR5P2Q8WZ92 322 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ZUFSPQ96AP4 578 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PTGDR2Q9Y5Y4 395 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 AGAP5A6NIR3 686 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 FBP2O00757 339 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PMM2O15305 246 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 IFNGR1P15260 489 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 RAET1LQ5VY80 246 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ZSCAN1Q8NBB4 408 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 SLC39A1Q9NY26 324 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 A0A0A6YYH2 397 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 A6NJ64 397 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 BRINP1O60477 761 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 IFNA5P01569 189 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 CELP19835 753 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 UGT2B10P36537 528 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 STK19P49842 368 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ATP6AP1Q15904 470 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 UBE2UQ5VVX9 321 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 UBQLNLQ8IYU4 475 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 PSAT1Q9Y617 370 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 GRXCR2A6NFK2 248 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 KLF11O14901 512 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF805Q5CZA5 627 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 TMIEQ8NEW7 156 aa17.63■□□□□ 0.41
SHANK1-202ENST00000359082 FCRL3Q96P31 734 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-202ENST00000359082 INMT-MINDY4F8WBC2 141 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 SNAP29O95721 258 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 MAS1P04201 325 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 FRKP42685 505 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 MAGEA3P43357 314 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 MCCD1P59942 119 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 GRB7Q14451 532 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 SPATS1Q496A3 300 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TMPPEQ6ZT21 453 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 OR51A7Q8NH64 312 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 POPDC3Q9HBV1 291 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms