RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MRGPREQ86SM8 312 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 TSLPQ969D9 159 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 ANKRD9Q96BM1 317 aaPredicted RBP14.59□□□□□ -0.07
TRIM13-201ENST00000356017 RBM18Q96H35 190 aaKnown RBP14.59□□□□□ -0.07
TRIM13-201ENST00000356017 EGLN2Q96KS0 407 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 CNTNAP3BQ96NU0 1288 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 CATSPER2Q96P56 530 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 PELOQ9BRX2 385 aaKnown RBP14.59□□□□□ -0.07
TRIM13-201ENST00000356017 CCDC28BQ9BUN5 200 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 ALOXE3Q9BYJ1 711 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 CNTNAP3Q9BZ76 1288 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 P4HTMQ9NXG6 502 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 BAIAP2L1Q9UHR4 511 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 POLHQ9Y253 713 aa14.59□□□□□ -0.07
TRIM13-201ENST00000356017 ACACAQ13085 2346 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 URB1O60287 2271 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 SOCS6O14544 535 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 RRP9O43818 475 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 PRKRAO75569 313 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 PRKAR1AP10644 381 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 G6PDP11413 515 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 PRPS1L1P21108 318 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 EFNA3P52797 238 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 OR4D2P58180 307 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 IGLV3-21P80748 117 aaPredicted RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 LSM12Q3MHD2 195 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 CPEB2Q7Z5Q1 589 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 TMEM151BQ8IW70 566 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 OR11G2Q8NGC1 345 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 MTERF3Q96E29 417 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 ZNF764Q96H86 408 aaPredicted RBP14.58□□□□□ -0.08
TRIM13-201ENST00000356017 FER1L6-AS2Q96M78 137 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 OR52B2Q96RD2 323 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 REEP4Q9H6H4 257 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 GIMAP4Q9NUV9 329 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 TAS2R7Q9NYW3 318 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 HEY2Q9UBP5 337 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 DCTN4Q9UJW0 460 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 UTS2RQ9UKP6 389 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 CES1P1Q9UKY3 287 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 CLDN16Q9Y5I7 305 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 ZNF780BQ9Y6R6 833 aa14.58□□□□□ -0.08
TRIM13-201ENST00000356017 A0A0G2JND7 137 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 SRRM3A6NNA2 597 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-201ENST00000356017 UBDO15205 165 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 IFNA16P05015 189 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 COX7A2P14406 83 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 IDO1P14902 403 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 HPCAL1P37235 193 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 RRADP55042 308 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 DIO3P55073 304 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 GNGT1P63211 74 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 PLIN5Q00G26 463 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 PTGR1Q14914 329 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 GSTA3Q16772 222 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 SFT2D3Q587I9 215 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 LANCL3Q6ZV70 420 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 NDUFAF7Q7L592 441 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 OR4N5Q8IXE1 308 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 TMEM102Q8N9M5 508 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-201ENST00000356017 KLHL29Q96CT2 875 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 THOC1Q96FV9 657 aaKnown RBP14.57□□□□□ -0.08
TRIM13-201ENST00000356017 PRPF18Q99633 342 aaKnown RBP14.57□□□□□ -0.08
TRIM13-201ENST00000356017 LPAR4Q99677 370 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 EBF4Q9BQW3 602 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 ZNF700Q9H0M5 742 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 CPNE5Q9HCH3 593 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 ADAP2Q9NPF8 381 aa14.57□□□□□ -0.08
TRIM13-201ENST00000356017 IGHV1-45A0A0A0MS14 117 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 NSG1A0A0A6YYJ2 146 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 GMNCA6NCL1 334 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 WASHC1A8K0Z3 465 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 DYRK3O43781 588 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 TBX19O60806 448 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 ERAL1O75616 437 aaKnown RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 FURINP09958 794 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 SLC35E2P0CK97 266 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 ICAM2P13598 275 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 CSNK2A2P19784 350 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 XKP51811 444 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 CLDN8P56748 225 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 C21orf58P58505 322 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 IRX1P78414 480 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 ATP1A4Q13733 1029 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 RPS6KA2Q15349 733 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 TERF2Q15554 542 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 TICAM1Q8IUC6 712 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 ST13P4Q8IZP2 240 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 MMP21Q8N119 569 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 CLHC1Q8NHS4 586 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 RFWD2Q8NHY2 731 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 UCN3Q969E3 161 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 C8orf44Q96CB5 159 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 RILPQ96NA2 401 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 DGAT2Q96PD7 388 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 TUBB6Q9BUF5 446 aa14.56□□□□□ -0.08
TRIM13-201ENST00000356017 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
TRIM13-201ENST00000356017 AIG1Q9NVV5 245 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms