RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 MCUR1Q96AQ8 359 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ROPN1LQ96C74 230 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 DPYSL5Q9BPU6 564 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ZPBPQ9BS86 351 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 HAUS8Q9BT25 410 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 EFCAB11Q9BUY7 163 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 MVB12BQ9H7P6 319 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 NOL11Q9H8H0 719 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 BRF2Q9HAW0 419 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 KLC4Q9NSK0 619 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 TRNAU1APQ9NX07 287 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 TMEM9Q9P0T7 183 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 STOX2Q9P2F5 926 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 POLG2Q9UHN1 485 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ZNF225Q9UK10 706 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 POLHQ9Y253 713 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 COQ6Q9Y2Z9 468 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 COPG1Q9Y678 874 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 KCNE2Q9Y6J6 123 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 F8P00451 2351 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CSMD2Q7Z408 3487 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PDZD2O15018 2839 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 POLQO75417 2590 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 SETD2Q9BYW2 2564 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 KCNE1BA0A087WTH5 132 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 IGHV1OR21-1A0A087WYE8 117 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TMEM202A6NGA9 273 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NCF1BA6NI72 391 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NCF1CA8MVU1 366 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PSMD12O00232 456 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 HNRNPRO43390 633 aaKnown RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CCNT2O60583 730 aaKnown RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 SKAP2O75563 359 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 RASSF9O75901 435 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 GUCA1CO95843 209 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PLATP00750 562 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 JUNP05412 331 aaKnown RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CAPN1P07384 714 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 KRT16P08779 473 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 COX4I1P13073 169 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NCF1P14598 390 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 SLC2A4P14672 509 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NCF2P19878 526 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 IDSP22304 550 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 JAK1P23458 1154 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 F8A1P23610 371 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 HRH2P25021 359 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 IMPA1P29218 277 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 GPR3P46089 330 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 HSPA7P48741 367 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 HNRNPFP52597 415 aaKnown RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 C21orf58P58505 322 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 EMX2Q04743 252 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 SQSTM1Q13501 440 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CYLC2Q14093 348 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 RCAN2Q14206 197 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 INPP5JQ15735 1006 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CYP2A13Q16696 494 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TRMT5Q32P41 509 aaKnown RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PTCHD3Q3KNS1 767 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NADK2Q4G0N4 442 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PYCR3Q53H96 274 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 VWA5B1Q5TIE3 1220 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 GRHL2Q6ISB3 625 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PRMT9Q6P2P2 845 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 AGTRAPQ6RW13 159 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CEACAM20Q6UY09 585 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 MSANTD1Q6ZTZ1 278 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 APLFQ8IW19 511 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CCDC103Q8IW40 242 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 ESX1Q8N693 406 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PCYOX1LQ8NBM8 494 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 PLA2G15Q8NCC3 412 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 OR4F6Q8NGB9 312 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 OR52B6Q8NGF0 335 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 OR9A1PQ8NGU1 263 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CCL4L1Q8NHW4 92 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 AGR3Q8TD06 166 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TUBGCP3Q96CW5 907 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 C5orf34Q96MH7 638 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 OR2M4Q96R27 311 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 SERPINI1Q99574 410 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CTRCQ99895 268 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TBC1D10AQ9BXI6 508 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TUBB1Q9H4B7 451 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 WDR55Q9H6Y2 383 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 ACTR8Q9H981 624 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 CCDC177Q9NQR7 707 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-201ENST00000355766 ARL8BQ9NVJ2 186 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 AIG1Q9NVV5 245 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 NMRK1Q9NWW6 199 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 TAS2R1Q9NYW7 299 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 ARMCX1Q9P291 453 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 ASB1Q9Y576 335 aa6.61□□□□□ -1.35
VPS13A-201ENST00000355766 C15orf38-AP3S2A0A0A6YYH1 394 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms