RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ENPP2Q13822 863 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 TIGD6Q17RP2 521 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 STX19Q8N4C7 294 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 GTPBP3Q969Y2 492 aaKnown RBP21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 INSM2Q96T92 566 aaPredicted RBP21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 NRTNQ99748 197 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 EHD3Q9NZN3 535 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 OXSR1O95747 527 aaPredicted RBP21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 GASTP01350 101 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 MAGEA8P43361 318 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 CRISP1P54107 249 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 IRF4Q15306 451 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 UBE3DQ7Z6J8 389 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 ZHX1-C8orf76Q96EF9 292 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 CAMK1GQ96NX5 476 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 FAIM2Q9BWQ8 316 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 NMNAT1Q9HAN9 279 aaPredicted RBP21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 WDR37Q9Y2I8 494 aa21.13■□□□□ 0.97
NKX2-1-201ENST00000354822 COL4A3Q01955 1670 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ZAR1LA6NP61 321 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 HMGN4O00479 90 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 LCMT2O60294 686 aaKnown RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 SERPINB7O75635 380 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ADAP00813 363 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 IDUAP35475 653 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 CLK1P49759 484 aaKnown RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 SMIM11AP58511 58 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 RPS26P62854 115 aaKnown RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 NUMA1Q14980 2115 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 SHHQ15465 462 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 FRMPD2BQ6IN97 320 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ZNF770Q6IQ21 691 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 DUS1LQ6P1R4 473 aaKnown RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 OR6Q1Q8NGQ2 317 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 C9orf43Q8TAL5 461 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 CREB3L4Q8TEY5 395 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ZNF354BQ96LW1 612 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 CDCA3Q99618 268 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 AMBNQ9NP70 447 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 OSGIN1Q9UJX0 560 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 A0A0A6YYD5 115 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ANTXRLA6NF34 631 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 EFCAB10A6NFE3 127 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 KPNA4O00629 521 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 PAK4O96013 591 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ACP5P13686 325 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 POU2F1P14859 743 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 PBX2P40425 430 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 OLR1P78380 273 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 RPS26P11Q5JNZ5 115 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 KLHL17Q6TDP4 642 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 ADCK2Q7Z695 626 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC44A2Q8IWA5 706 aaPredicted RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 OR2L8Q8NGY9 312 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 OSGEPL1Q9H4B0 414 aa21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 CNOT2Q9NZN8 540 aaKnown RBP21.12■□□□□ 0.97
NKX2-1-201ENST00000354822 LRIT2A6NDA9 550 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 M0R082 166 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 AIREO43918 545 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 ALDH4A1P30038 563 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 LIPAP38571 399 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 KCNJ5P48544 419 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 LIM2P55344 173 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 RPS21P63220 83 aaKnown RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 SGCGQ13326 291 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 MLF2Q15773 248 aaPredicted RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 TP53I13Q8NBR0 393 aaPredicted RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 OR2A1Q8NGT9 310 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 ZNF675Q8TD23 568 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 TEFMQ96QE5 360 aaKnown RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 CLN6Q9NWW5 311 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 TEX10Q9NXF1 929 aaPredicted RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 MS4A12Q9NXJ0 267 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 P2RX2Q9UBL9 471 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 FTSJ1Q9UET6 329 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 PNMA8BQ9ULN7 279 aaPredicted RBP21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 MGAT4BQ9UQ53 548 aa21.11■□□□□ 0.97
NKX2-1-201ENST00000354822 TOR1BO14657 336 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 FFAR1O14842 300 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 HNRNPCP07910 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 CHMP24386 653 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 SSR2P43308 183 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 ARFIP1P53367 373 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 ST3GAL4Q11206 333 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 KRT33BQ14525 404 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 SYT16Q17RD7 645 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 DCST1Q5T197 706 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 GPR32P1Q8NGA4 272 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 RAB8BQ92930 207 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 DHRS1Q96LJ7 313 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 DPH7Q9BTV6 452 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 GPR83Q9NYM4 423 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 C5AR2Q9P296 337 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 RHCGQ9UBD6 479 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 B4GALT2O60909 372 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 CNOT3O75175 753 aaKnown RBP21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 GUCY1B2O75343 617 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 STSP08842 583 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 WASP42768 502 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms