RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SSR4P51571 173 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 DCAF7P61962 342 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 MPP1Q00013 466 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 TAP2Q03519 686 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 ACVR1Q04771 509 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 C2orf54Q08AI8 447 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 KCNJ11Q14654 390 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 RTL6Q6ICC9 239 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 C11orf63Q6NUN7 778 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 PCGF5Q86SE9 256 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 SLC26A11Q86WA9 606 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 FAM222BQ8WU58 562 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 SLC13A3Q8WWT9 602 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 ALKBH8Q96BT7 664 aaKnown RBP10.41□□□□□ -0.74
RTN3-204ENST00000354497 TBC1D20Q96BZ9 403 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 THAP11Q96EK4 314 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 BIRC8Q96P09 236 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 ZNF184Q99676 751 aaPredicted RBP10.41□□□□□ -0.74
RTN3-204ENST00000354497 TTTY12Q9BZ98 90 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 RHBGQ9H310 441 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 LDAHQ9H6V9 325 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 PLGRKTQ9HBL7 147 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 PALMDQ9NP74 551 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 DEPPQ9NTK1 212 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 TMEM184CQ9NVA4 438 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 STX18Q9P2W9 335 aaKnown RBP10.41□□□□□ -0.74
RTN3-204ENST00000354497 RIMKLBQ9ULI2 386 aa10.41□□□□□ -0.74
RTN3-204ENST00000354497 DRG1Q9Y295 367 aaKnown RBP10.41□□□□□ -0.74
RTN3-204ENST00000354497 A0A0G2JMM0 328 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 A0A1W2PPB8 328 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 A0A1W2PRS3 328 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 A8MVJ9 347 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 KIR3DP1A8MWS1 328 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 CENPBD1B2RD01 187 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 E5RI56 91 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SLC22A1O15245 554 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 NDUFB5O43674 189 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 B3GALT4O96024 378 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SERPIND1P05546 499 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SLC35G6P0C7Q6 338 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 M6PRP20645 277 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 MAOAP21397 527 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 FUT4P22083 530 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 IL10P22301 178 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SERPINB3P29508 390 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 ATP5DP30049 168 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 HSD17B3P37058 310 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 MAN2A2P49641 1150 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 BTG2P78543 158 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SLC34A1Q06495 639 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 E2F2Q14209 437 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 POU4F3Q15319 338 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 TNFAIP8L3Q5GJ75 292 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SLC22A16Q86VW1 577 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 P3H2Q8IVL5 708 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 PSD4Q8NDX1 1056 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 OR2M7Q8NG81 312 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 GABPB2Q8TAK5 448 aaPredicted RBP10.4□□□□□ -0.75
RTN3-204ENST00000354497 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 PRPF18Q99633 342 aaKnown RBP10.4□□□□□ -0.75
RTN3-204ENST00000354497 YIPF4Q9BSR8 244 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 SARGQ9BW04 601 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 CHRAC1Q9NRG0 131 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 HPF1Q9NWY4 346 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 GALPQ9UBC7 116 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 B4GALT7Q9UBV7 327 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 GUCA1BQ9UMX6 200 aa10.4□□□□□ -0.75
RTN3-204ENST00000354497 ATP6AP2A0A1C7CYW4 349 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 OR14I1A6ND48 311 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 TMEM114B3SHH9 223 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 INAFM1C9JVW0 142 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 H7C1Q1 480 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 FBP2O00757 339 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 NDUFS4O43181 175 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 CHST10O43529 356 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 WDR1O75083 606 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 DNAJB6O75190 326 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 ATP6AP2O75787 350 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 MYO1DO94832 1006 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 UBL4AP11441 157 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 BMP5P22003 454 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 PTPN7P35236 360 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 MAGEA5P43359 124 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 ASCL1P50553 236 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 HADHBP55084 474 aaKnown RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 SESN2P58004 480 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 TBL3Q12788 808 aaKnown RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 DEFB134Q4QY38 66 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 Q5PR19 223 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 NDUFAF5Q5TEU4 345 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 SHEQ5VZ18 495 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 CAPN13Q6MZZ7 669 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 IL20RBQ6UXL0 311 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 C16orf47Q6ZP98 133 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 NET1Q7Z628 596 aaPredicted RBP10.39□□□□□ -0.75
RTN3-204ENST00000354497 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 FAM13CQ8NE31 585 aa10.39□□□□□ -0.75
RTN3-204ENST00000354497 ASB15Q8WXK1 588 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms