RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PRR22Q8IZ63 422 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 A0A1B0GVT2 93 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 RCVRNP35243 200 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMC6-201ENST00000351948 OR8J3Q8NGG0 315 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 TMEM125Q96AQ2 219 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 C6orf106Q9H6K1 298 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 KCNJ13O60928 360 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 MC3RP41968 323 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 MAGEA3P43357 314 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 OMPP47874 163 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 IST1P53990 364 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 TAS2R38P59533 333 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ATCAYQ86WG3 371 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 UBQLNLQ8IYU4 475 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ACOT4Q8N9L9 421 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 TOR3AQ9H497 397 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 STMN3Q9NZ72 180 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 PRODH2Q9UF12 536 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 SOX30O94993 753 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 KCNJ5P48544 419 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 MEP1AQ16819 746 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 KRT74Q7RTS7 529 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 NAGSQ8N159 534 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ELSPBP1Q96BH3 223 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 CD180Q99467 661 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 MCUBQ9NWR8 336 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ASNA1O43681 348 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 RENP00797 406 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 TLR1Q15399 786 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ATG9BQ674R7 924 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 TMEM19Q96HH6 336 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 CRNNQ9UBG3 495 aaPredicted RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 ATG2BQ96BY7 2078 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 SCN1AP35498 2009 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 POM121BA6NF01 834 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 MAGEB3O15480 346 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 HTRA2O43464 458 aaPredicted RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 AIREO43918 545 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 CTC1Q2NKJ3 1217 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 CRTC2Q53ET0 693 aaPredicted RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 BTN2A1Q7KYR7 527 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 POC5Q8NA72 575 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 OR52P1PQ8NH57 321 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 MCCC2Q9HCC0 563 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
SMC6-201ENST00000351948 DKKL1Q9UK85 242 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 NAALAD2Q9Y3Q0 740 aa13.06□□□□□ -0.32
SMC6-201ENST00000351948 SLC35F4A4IF30 521 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NME4O00746 187 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 IGLV3-27P01718 113 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 DRD2P14416 443 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 ARNTP27540 789 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 HOXC12P31275 282 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 TCEANCQ8N8B7 351 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 OR5D16Q8NGK9 328 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 ALOXE3Q9BYJ1 711 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 BCL2L14Q9BZR8 327 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 A0A0J9YY10 115 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 LOC100130705A0A1B0GUX0 176 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 CAPN14A8MX76 684 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 MPZL2O60487 215 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 AHSA1O95433 338 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NPPAP01160 153 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 PENKP01210 267 aaPredicted RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 NKAIN2Q5VXU1 208 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 KLHL17Q6TDP4 642 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 LCTLQ6UWM7 567 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 UBXN10Q96LJ8 280 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 FGF22Q9HCT0 170 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 ZFR2Q9UPR6 939 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 KIR2DS5A0A0G2JLQ3 304 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 A0A0G2JNG1 304 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 KIR2DS3K7RE56 304 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms