RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 HBQ1P09105 142 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 FOXA1P55317 472 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 GALNT5Q7Z7M9 940 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SUN3Q8TAQ9 357 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 HTRA1Q92743 480 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 COQ10AQ96MF6 247 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 G6PC3Q9BUM1 346 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ACPTQ9BZG2 426 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SP140LQ9H930 580 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PRTFDC1Q9NRG1 225 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ST14Q9Y5Y6 855 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 CYP4B1P13584 511 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 GRM7Q14831 915 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CATSPEREQ5SY80 951 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CPZQ66K79 652 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SERPINA11Q86U17 422 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 ZSWIM9Q86XI8 627 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OR2L5Q8NG80 312 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OR5AK3PQ8NH89 298 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 NEIL2Q969S2 332 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 UQCC2Q9BRT2 126 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 FZD3Q9NPG1 666 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SSR3Q9UNL2 185 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 RPH3AQ9Y2J0 694 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PCDHGB1Q9Y5G3 927 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 RASAL1O95294 804 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 NADKO95544 446 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 DDCP20711 480 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CCR2P41597 374 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 STT3AP46977 705 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 EIF4EBP2Q13542 120 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 AP3S1Q92572 193 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 HCN4Q9Y3Q4 1203 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SLC5A10A0PJK1 596 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OXSR1O95747 527 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 C8BP07358 591 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SYPP08247 313 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 F3P13726 295 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PRG2P13727 222 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SDC1P18827 310 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 NR4A1P22736 598 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 LHCGRP22888 699 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CXCL12P48061 93 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 XKP51811 444 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 ARSFP54793 590 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 ARHGAP40Q5TG30 622 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TAMM41Q96BW9 452 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TOE1Q96GM8 510 aaKnown RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SLITRK5O94991 958 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SAGP10523 405 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 GDI2P50395 445 aaKnown RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM164Q5U3C3 297 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OR4K1Q8NGD4 311 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 OR52E1Q8NGJ3 308 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SFXN5Q8TD22 340 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 MYEOVQ96EZ4 313 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CRELD1Q96HD1 420 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TRPV4Q9HBA0 871 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SDHAF3Q9NRP4 125 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 ACTR10Q9NZ32 417 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CLEC4EQ9ULY5 219 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PROS1P07225 676 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 BMP2P12643 396 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PORP16435 677 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CSTF2P33240 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 TAS2R38P59533 333 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 POU6F2P78424 691 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 DUS1LQ6P1R4 473 aaKnown RBP11.61□□□□□ -0.55
SMAD9-201ENST00000350148 ZNF550Q7Z398 422 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 LKAAEAR1Q8TD35 194 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 MOCOSQ96EN8 888 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 SLC35C2Q9NQQ7 365 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 HSPE1-MOB4S4R3N1 261 aa11.61□□□□□ -0.55
SMAD9-201ENST00000350148 CPED1A4D0V7 1026 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 OR7A17O14581 309 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 RCBTB2O95199 551 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 MT-ND1P03886 318 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 GRK6P43250 576 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 TRAM2Q15035 370 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 WSCD2Q2TBF2 565 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 TECPR1Q7Z6L1 1165 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 JAZF1Q86VZ6 243 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 FAM98AQ8NCA5 519 aaKnown RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 UCK2Q9BZX2 261 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 RPF2Q9H7B2 306 aaKnown RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 POLR1DQ9Y2S0 133 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 TYRP1P17643 537 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 VSX2P58304 361 aaPredicted RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 RPE65Q16518 533 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PRSS36Q5K4E3 855 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms