RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TMEM245Q9H330 911 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 PRM3Q9NNZ6 103 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 NECTIN3Q9NQS3 549 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.74□□□□□ -1.49
CLCN3-201ENST00000347613 MAN2C1Q9NTJ4 1040 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 TBCCD1Q9NVR7 557 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 POU2F3Q9UKI9 436 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 RBMX2Q9Y388 322 aaKnown RBP5.74□□□□□ -1.49
CLCN3-201ENST00000347613 TPRKBQ9Y3C4 175 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 ORC6Q9Y5N6 252 aa5.74□□□□□ -1.49
CLCN3-201ENST00000347613 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 M0R3G1 203 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 FOXE1O00358 373 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TBX1O43435 398 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 AIREO43918 545 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 HBQ1P09105 142 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 C8orf89P0DMQ9 161 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 OR12D1P0DN82 309 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ADH5P11766 374 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SOX18P35713 384 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SLC15A1P46059 708 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 RECQLP46063 649 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 RGS6P49758 472 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 HMGA2P52926 109 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PCBP4P57723 403 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TFF2Q03403 129 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 RFX4Q33E94 735 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 GCNT6Q5T4J0 391 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 NIPAL1Q6NVV3 410 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PARP16Q8N5Y8 322 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CELF2-AS1Q8N7Q2 184 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SLC7A13Q8TCU3 470 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 FGF11Q92914 225 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SLC38A4Q969I6 547 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 EXOSC8Q96B26 276 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PPCDCQ96CD2 204 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 C16orf58Q96GQ5 468 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM19Q96HH6 336 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 APOL4Q9BPW4 351 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 KCNS3Q9BQ31 491 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PLA2G12AQ9BZM1 189 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM38AQ9H6F2 299 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ABCB10Q9NRK6 738 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 C14orf119Q9NWQ9 140 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 DNAJC27Q9NZQ0 273 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 MARK1Q9P0L2 795 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ASF1AQ9Y294 204 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CARD8Q9Y2G2 431 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 IFT52Q9Y366 437 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM221A6NGB7 291 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CLDN24A6NM45 220 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 OR52A4PA6NMU1 304 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ZAR1LA6NP61 321 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ARHGAP33O14559 1287 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SLC22A1O15245 554 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 AQP9O43315 295 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 GNRH1P01148 92 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PCCBP05166 539 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ARAFP10398 606 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CDH3P22223 829 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 GAS1P54826 345 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 WSCD2Q2TBF2 565 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 BCL7AQ4VC05 210 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 IFI44LQ53G44 452 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ARMCX4Q5H9R4 360 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ERICH5Q6P6B1 374 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CCDC149Q6ZUS6 474 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 METTL3Q86U44 580 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SFTPA2Q8IWL1 248 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 TERB1Q8NA31 727 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 OR2L2Q8NH16 312 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PHF10Q8WUB8 498 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 BADQ92934 168 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ZHX1-C8orf76Q96EF9 292 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 OPALINQ96PE5 141 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 EMILIN2Q9BXX0 1053 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 EHD1Q9H4M9 534 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 SLC25A19Q9HC21 320 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 HHATLQ9HCP6 504 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 MYNNQ9NPC7 610 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ADPRHL2Q9NX46 363 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ERVK13-1Q9NX77 482 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 NFKBIL1Q9UBC1 381 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 DKK3Q9UBP4 350 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF282Q9UDV7 671 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 BLOC1S6Q9UL45 172 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 A4GNTQ9UNA3 340 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 B3GNT3Q9Y2A9 372 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 LSM2Q9Y333 95 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 IRAK3Q9Y616 596 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 CENPVL1A0A0U1RR11 272 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ANHXE9PGG2 379 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 DPM1O60762 260 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 NOL3O60936 208 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 DNAJB5O75953 348 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 THY1P04216 161 aa5.73□□□□□ -1.49
CLCN3-201ENST00000347613 ELAVL4P26378 380 aaKnown RBP5.73□□□□□ -1.49
CLCN3-201ENST00000347613 PEBP1P30086 187 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms