RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 FSCN3Q9NQT6 498 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 SEMA3GQ9NS98 782 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 RAPGEFL1Q9UHV5 662 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 MAP4K5Q9Y4K4 846 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 V9GYQ6 96 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 SERPINA1P01009 418 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 NUDT7P0C024 238 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 RAP2AP10114 183 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 PNLIPP16233 465 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 MPIP34949 423 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 NR0B2Q15466 257 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 HMBOX1Q6NT76 420 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 NIPAL1Q6NVV3 410 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 PDSS2Q86YH6 399 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 ARHGEF39Q8N4T4 335 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 Q8N9G6 341 aaPredicted RBP20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 C10orf90Q96M02 699 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 RNF145Q96MT1 663 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 ZNF184Q99676 751 aaPredicted RBP20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 TMEM38AQ9H6F2 299 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 GAREM1Q9H706 876 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 YY1AP1Q9H869 796 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 CAPN10Q9HC96 672 aa20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 SAMD4AQ9UPU9 718 aaKnown RBP20.27■□□□□ 0.83
TSPAN3-202ENST00000346495 ZNF860A6NHJ4 632 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 SP9P0CG40 484 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 KDELR2P33947 212 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 CCT3P49368 545 aaKnown RBP20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 PRIM2P49643 509 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 CCT8P50990 548 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 SKP1P63208 163 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 OLR1P78380 273 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 TAF11Q15544 211 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 AMZ1Q400G9 498 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 TCTE1Q5JU00 501 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 IZUMO2Q6UXV1 221 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 TMEM64Q6YI46 380 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 PRSS41Q7RTY9 318 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 AMIGO2Q86SJ2 522 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 KBTBD2Q8IY47 623 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 ZBTB44Q8NCP5 570 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 ZNF681Q96N22 645 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 CHID1Q9BWS9 393 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 MAGIXQ9H6Y5 334 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 AGPAT4Q9NRZ5 378 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 KLHL3Q9UH77 587 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 RPS6KA6Q9UK32 745 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 SLC6A14Q9UN76 642 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 DTNAQ9Y4J8 743 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 MN1Q10571 1320 aaPredicted RBP20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 SDK1Q7Z5N4 2213 aa20.26■□□□□ 0.83
TSPAN3-202ENST00000346495 ADAMTS9Q9P2N4 1935 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 TPST1O60507 370 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 CTSBP07858 339 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 BMP2P12643 396 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 MYF5P13349 255 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 CD1CP29017 333 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 FEN1P39748 380 aaKnown RBP20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 C16orf72Q14CZ0 275 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 ENPP6Q6UWR7 440 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 C6orf120Q7Z4R8 191 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 CCDC116Q8IYX3 515 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 CA13Q8N1Q1 262 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 ANKFN1Q8N957 763 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 OR4K14Q8NGD5 310 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 SUN3Q8TAQ9 357 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 SFXN5Q8TD22 340 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 N4BP2L2Q92802 583 aaPredicted RBP20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 CCDC74AQ96AQ1 378 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 SLC47A1Q96FL8 570 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 TMEM121BQ9BXQ6 578 aaPredicted RBP20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 SEMA6AQ9H2E6 1030 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 PCDH15Q96QU1 1955 aa20.25■□□□□ 0.83
TSPAN3-202ENST00000346495 DNAJB6O75190 326 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 PRKD3O94806 890 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 CER1O95813 267 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 C8orf89P0DMQ9 161 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 CASP9P55211 416 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 DSTNP60981 165 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 ZNF630Q2M218 657 aaPredicted RBP20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 LRRC23Q53EV4 343 aaPredicted RBP20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 GARNL3Q5VVW2 1013 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SLC23A3Q6PIS1 610 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 WDR74Q6RFH5 385 aaPredicted RBP20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 BMP8AQ7Z5Y6 402 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SPRED1Q7Z699 444 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SLC30A8Q8IWU4 369 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 FAM181AQ8N9Y4 354 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 MOAP1Q96BY2 351 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 PYURFQ96I23 114 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 CSF3RQ99062 836 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SEMA5BQ9P283 1151 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SGK494L7N484 410 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 MAGEA8P43361 318 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 ARL4DP49703 201 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 RAB38P57729 211 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 HSD11B2P80365 405 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 CFHR1Q03591 330 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 DUSP2Q05923 314 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 ATP6AP1Q15904 470 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms