RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IQCCQ4KMZ1 466 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 NHSL2Q5HYW2 709 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 OTUD3Q5T2D3 398 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 INTS11Q5TA45 600 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 ERICH5Q6P6B1 374 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 ARHGEF39Q8N4T4 335 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 OR5D16Q8NGK9 328 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 PSMA8Q8TAA3 256 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 NEURL3Q96EH8 262 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 HSH2DQ96JZ2 352 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SLC38A3Q99624 504 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 BARD1Q99728 777 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 NLNQ9BYT8 704 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 ACSS1Q9NUB1 689 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 ZNF639Q9UID6 485 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 PADI4Q9UM07 663 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 RNF215Q9Y6U7 377 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 U3KQV3 271 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 RP1P56715 2156 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 MYO1GB0I1T2 1018 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 FAM227AF5H4B4 570 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 PROS1P07225 676 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 FCGR1AP12314 374 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 ZNF23P17027 643 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 FUT4P22083 530 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 ALDH4A1P30038 563 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 TSFMP43897 325 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 GSTM5P46439 218 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CAPZBP47756 277 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 DHPSP49366 369 aaPredicted RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 CCT3P49368 545 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 ARFIP1P53367 373 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 C21orf59P57076 290 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 ID2Q02363 134 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 MED21Q13503 144 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 TP53BP2Q13625 1128 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 SCARB2Q14108 478 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 LAPTM4AQ15012 233 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 RPS26P11Q5JNZ5 115 aaPredicted RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 GCNT6Q5T4J0 391 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CEACAM20Q6UY09 585 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 RBM12BQ8IXT5 1001 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 CSNK1A1LQ8N752 337 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 C19orf47Q8N9M1 422 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 CAMKVQ8NCB2 501 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 TAMM41Q96BW9 452 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 TPD52L3Q96J77 140 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 KLHL3Q9UH77 587 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 DAPP1Q9UN19 280 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CCDC88CQ9P219 2028 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 M0QX08 132 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 DENRO43583 198 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 GNAO1P09471 354 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 ALOX12P18054 663 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 PRKACGP22612 351 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 MAGEA2P43356 314 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 PRIM2P49643 509 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CDK6Q00534 326 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CFHR1Q03591 330 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 RELAQ04206 551 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 C14orf28Q4W4Y0 310 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 ARMC6Q6NXE6 501 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 EIF3MQ7L2H7 374 aaKnown RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 SZRD1Q7Z422 152 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 SLC44A2Q8IWA5 706 aaPredicted RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 OR9A2Q8NGT5 310 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 MAGEE2Q8TD90 523 aaPredicted RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 RERGQ96A58 199 aaPredicted RBP12.81□□□□□ -0.36
CDC42-202ENST00000344548 TGM7Q96PF1 710 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 BBS4Q96RK4 519 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 YIPF4Q9BSR8 244 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 CORO2BQ9UQ03 480 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 NAALAD2Q9Y3Q0 740 aa12.81□□□□□ -0.36
CDC42-202ENST00000344548 UNC13CQ8NB66 2214 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 A0A1B0GTW7 788 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SGK494L7N484 410 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 HMGN4O00479 90 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 RASAL1O95294 804 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 CLIC3O95833 236 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 NELFEP18615 380 aaKnown RBP12.8□□□□□ -0.36
CDC42-202ENST00000344548 CTSKP43235 329 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 PRKAG1P54619 331 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 OR1D5P58170 312 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 KCNJ10P78508 379 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 MRPS35P82673 323 aaKnown RBP12.8□□□□□ -0.36
CDC42-202ENST00000344548 FADDQ13158 208 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SUZ12Q15022 739 aaKnown RBP12.8□□□□□ -0.36
CDC42-202ENST00000344548 MLC1Q15049 377 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 PDK3Q15120 406 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SPDYE7PQ495Y7 208 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 CYBRD1Q53TN4 286 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 WDR45BQ5MNZ6 344 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms