RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ZIK1Q3SY52 487 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 ANKRD34AQ69YU3 496 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ARMC6Q6NXE6 501 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 RNF44Q7L0R7 432 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 PIWIL3Q7Z3Z3 882 aaKnown RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 GKN2Q86XP6 184 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TBC1D20Q96BZ9 403 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 FBXL20Q96IG2 436 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 SPACA7Q96KW9 195 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TRAPPC9Q96Q05 1148 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ROGDIQ9GZN7 287 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 USE1Q9NZ43 259 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 BAG5Q9UL15 447 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ENTPD4Q9Y227 616 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 U3KQV3 271 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 URADA6NGE7 173 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 M0QX08 132 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 VILLO15195 856 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 DCNP07585 359 aaKnown RBP18.9■□□□□ 0.62
RTN1-202ENST00000342503 C8orf89P0DMQ9 161 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 THRBP10828 461 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 ADARB1P78563 741 aaKnown RBP18.9■□□□□ 0.62
RTN1-202ENST00000342503 PPP2R2BQ00005 443 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 TP53BP2Q13625 1128 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 CRB2Q5IJ48 1285 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.9■□□□□ 0.62
RTN1-202ENST00000342503 HIPK1Q86Z02 1210 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 SLC30A8Q8IWU4 369 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 CCDC116Q8IYX3 515 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 SUN3Q8TAQ9 357 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 RERGQ96A58 199 aaPredicted RBP18.9■□□□□ 0.62
RTN1-202ENST00000342503 C7orf34Q96L11 122 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 SERINC2Q96SA4 455 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 A4GALTQ9NPC4 353 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 CD320Q9NPF0 282 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 PNPLA3Q9NST1 481 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 DOLKQ9UPQ8 538 aa18.9■□□□□ 0.62
RTN1-202ENST00000342503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 A0A1W2PS29 197 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 ALBP02768 609 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 EIF2S1P05198 315 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 PRKACGP22612 351 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 PTGER1P34995 402 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 FEN1P39748 380 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 CXCL12P48061 93 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 PCBP3P57721 371 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 ELOAQ14241 798 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 IQCCQ4KMZ1 466 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 DEFB134Q4QY38 66 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 SHQ1Q6PI26 577 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 TMEFF1Q8IYR6 380 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 ARL14Q8N4G2 192 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 KLHL6Q8WZ60 621 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 SLC35G5Q96KT7 338 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 RBM4BQ9BQ04 359 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 RBM4Q9BWF3 364 aaKnown RBP18.89■□□□□ 0.61
RTN1-202ENST00000342503 SERHL2Q9H4I8 314 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 ZSCAN32Q9NX65 697 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 POMT2Q9UKY4 750 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 TMEM131Q92545 1883 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 ABCA7Q8IZY2 2146 aa18.89■□□□□ 0.61
RTN1-202ENST00000342503 K7ESF4 209 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 CLIC3O95833 236 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 NR2F6P10588 404 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 ALPPL2P10696 532 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 CSNK2A2P19784 350 aaPredicted RBP18.88■□□□□ 0.61
RTN1-202ENST00000342503 ITGA1P56199 1179 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 NXPH1P58417 271 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 RUNX2Q13950 521 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 REEP3Q6NUK4 255 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SLC36A4Q6YBV0 504 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 ABHD13Q7L211 337 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 C1orf216Q8TAB5 229 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SPPL2AQ8TCT8 520 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 RAB8BQ92930 207 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SEMA3GQ9NS98 782 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 GIMAP4Q9NUV9 329 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 IFT80Q9P2H3 777 aaPredicted RBP18.88■□□□□ 0.61
RTN1-202ENST00000342503 MRPS2Q9Y399 296 aaKnown RBP18.88■□□□□ 0.61
RTN1-202ENST00000342503 H0YAE9 185 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 HMGN4O00479 90 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 DNAJB6O75190 326 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 BCHEP06276 602 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 LINGO3P0C6S8 592 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 CPN2P22792 545 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 TNFRSF17Q02223 184 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 CEP68Q76N32 757 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SZRD1Q7Z422 152 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 UBALD2Q8IYN6 164 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SLC38A5Q8WUX1 472 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 MAGED4Q96JG8 741 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 BARD1Q99728 777 aaKnown RBP18.88■□□□□ 0.61
RTN1-202ENST00000342503 SEMA6CQ9H3T2 930 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 ZCCHC3Q9NUD5 404 aaKnown RBP18.88■□□□□ 0.61
RTN1-202ENST00000342503 KCMF1Q9P0J7 381 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 PHF11Q9UIL8 331 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 PADI2Q9Y2J8 665 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 SIT1Q9Y3P8 196 aa18.88■□□□□ 0.61
RTN1-202ENST00000342503 GON4LQ3T8J9 2241 aa18.87■□□□□ 0.61
RTN1-202ENST00000342503 A0A1B0GTW7 788 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms