RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 HMGCLP35914 325 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 AKR1D1P51857 326 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 DIO3P55073 304 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GRIK2Q13002 908 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 ZSWIM9Q86XI8 627 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PLD6Q8N2A8 252 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 HORMAD2Q8N7B1 307 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR51G2Q8NGK0 314 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR56A3Q8NH54 315 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR51A7Q8NH64 312 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 RHEBL1Q8TAI7 183 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 HHIPQ96QV1 700 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SLC35F4A4IF30 521 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MEIS3P2A8K0S8 358 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 AK1P00568 194 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 CXCL12P48061 93 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PXNP49023 591 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SHC2P98077 582 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SRYQ05066 204 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MALLQ13021 153 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 UNC5DQ6UXZ4 953 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 LRRC69Q6ZNQ3 347 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 ZFAND4Q86XD8 727 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 ERI1Q8IV48 349 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GID4Q8IVV7 300 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR4N5Q8IXE1 308 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 CHST14Q8NCH0 376 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 TOR1AIP2Q8NFQ8 470 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR8K5Q8NH50 307 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 CITED4Q96RK1 184 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 BARD1Q99728 777 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MROQ9BYG7 248 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 LINC00597Q9H2U6 94 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 A8MVJ9 347 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 FCER2P06734 321 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 PEPDP12955 493 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 FADDQ13158 208 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 GINS1Q14691 196 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 PTGR1Q14914 329 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 LAPTM4AQ15012 233 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 CLLU1OSQ5K130 101 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 OR52P1PQ8NH57 321 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 C7orf43Q8WVR3 580 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 AIFM2Q9BRQ8 373 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 HPF1Q9NWY4 346 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 FARSAQ9Y285 508 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 S1PR4O95977 384 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 SOX2P48431 317 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 MAZP56270 477 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 LRIT3Q3SXY7 679 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 IGDCC3Q8IVU1 814 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 BOLLQ8N9W6 283 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 S100A16Q96FQ6 103 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 NSUN5Q96P11 429 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 SLC22A4Q9H015 551 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF69Q9UC07 566 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 hCG_1807616A0A1W2PRN6 198 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 BHMG1C9JSJ3 638 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 RAD51DO75771 328 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 BCAS2O75934 225 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 MLC1Q15049 377 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 DEFB110Q30KQ9 67 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 SLC36A3Q495N2 470 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 KIAA1614Q5VZ46 1190 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 LYSMD4Q5XG99 296 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 GLT8D1Q68CQ7 371 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 TMED4Q7Z7H5 227 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 TMEM151BQ8IW70 566 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 OR2L2Q8NH16 312 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 OR14L1PQ8NHC6 308 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 FCRL3Q96P31 734 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 EXOSC1Q9Y3B2 195 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 UNC119BA6NIH7 251 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 ZSCAN5BA6NJL1 495 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 RTCAO00442 366 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 BPIP17213 487 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 ATP4BP51164 291 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 WSCD2Q2TBF2 565 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 FTMTQ8N4E7 242 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 KRTCAP2Q8N6L1 136 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 DENND6BQ8NEG7 585 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 PGAM5Q96HS1 289 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 YTHDF1Q9BYJ9 559 aaKnown RBP14.37□□□□□ -0.11
UBE3B-202ENST00000342494 DCSTAMPQ9H295 470 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 CDH10Q9Y6N8 788 aa14.37□□□□□ -0.11
UBE3B-202ENST00000342494 KANTRA0A1W2PQU2 76 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 TTLL8A6PVC2 850 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 LILRB3O75022 631 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 SPATS1Q496A3 300 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 TSPAN33Q86UF1 283 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 FN3KQ9H479 309 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 A0A096LPI6 279 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 PRAMEF26H0Y7S4 382 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 CDRT1O95170 752 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 RCAN2Q14206 197 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 CES4AQ5XG92 561 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 SHQ1Q6PI26 577 aaKnown RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 FIGNL1Q6PIW4 674 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms