RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 BEST1O76090 585 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 TSFMP43897 325 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 RAB7AP51149 207 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 ZNF679Q8IYX0 411 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 HDHD5Q9BXW7 423 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 POLMQ9NP87 494 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 ATXN7L1Q9ULK2 861 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 CLEC4EQ9ULY5 219 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 TSPAN11A1L157 253 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC22A2O15244 555 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 RFPL3O75679 317 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC22A5O76082 557 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 THBS2P35442 1172 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 GAS6Q14393 721 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 AAK1Q2M2I8 961 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 OR4F3Q6IEY1 312 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 LCN10Q6JVE6 187 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NAPRTQ6XQN6 538 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 C3P1Q6ZMU1 363 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 COX15Q7KZN9 410 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 HOXB13Q92826 284 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 HMCESQ96FZ2 354 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC6A6P31641 620 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 CDK6Q00534 326 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NPRL3Q12980 569 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 PAN3Q58A45 887 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC22A10Q63ZE4 541 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 FAM83FQ8NEG4 500 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 MOB1AQ9H8S9 216 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 TAS2R8Q9NYW2 309 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 FAM237AA0A1B0GTK4 181 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ANKRD28O15084 1053 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 FADS1O60427 444 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 STK17BO94768 372 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 BPIP17213 487 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ART1P52961 327 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SFT2D3Q587I9 215 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 LRIF1Q5T3J3 769 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ZNF648Q5T619 568 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 RBMXL1Q96E39 390 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 P2RY13Q9BPV8 354 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 CACNG6Q9BXT2 260 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 TESQ9UGI8 421 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 NEMP2A6NFY4 417 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ATG12O94817 140 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 GRPRP30550 384 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NAA10P41227 235 aaPredicted RBP12.36□□□□□ -0.43
USP47-202ENST00000339865 GPX6P59796 221 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ARHGAP11AQ6P4F7 1023 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 MBOAT1Q6ZNC8 495 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 ANKRD13BQ86YJ7 626 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 CNIH3Q8TBE1 160 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 CDC6Q99741 560 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 DEC1Q9P2X7 70 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 GTF2IRD1Q9UHL9 959 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 A0A1W2PS29 197 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ADRB2P07550 413 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PCSK2P16519 638 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 OR1D2P34982 312 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ADCYAP1R1P41586 468 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 FAM111BQ6SJ93 734 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 THAP4Q8WY91 577 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 GCDHQ92947 438 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 FAM122AQ96E09 287 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 TMEM74Q96NL1 305 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 XPNPEP1Q9NQW7 623 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 DKKL1Q9UK85 242 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ITM2AO43736 263 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 B4GALT2O60909 372 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 COQ9O75208 318 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CSNK2A2P19784 350 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 SLC2A5P22732 501 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SLX4IPQ5VYV7 408 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PIGWQ7Z7B1 504 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 C10orf82Q8WW14 230 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 LGALS12Q96DT0 336 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PRR11Q96HE9 360 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 RPL10LQ96L21 214 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 QRSL1Q9H0R6 528 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 ABCA1O95477 2261 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 A0A1W2PQ45 241 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 A0A1W2PQY0 241 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 A6NL46 340 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 DECR1Q16698 335 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 DUOXA1Q1HG43 343 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms