RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ANKRD60Q9BZ19 345 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 IL21RQ9HBE5 538 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 ADPRHL2Q9NX46 363 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 MUTYHQ9UIF7 546 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 A6NHS1 94 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 MYO1GB0I1T2 1018 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 K7ESF4 209 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 GUCY1B2O75343 617 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ALPLP05186 524 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ST6GAL1P15907 406 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 NTSP30990 170 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 DCTP40126 519 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 TSFMP43897 325 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ALDH3A2P51648 485 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ARFIP1P53367 373 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 KCNJ10P78508 379 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 DAG1Q14118 895 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 DEFB110Q30KQ9 67 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 OR52E8Q6IFG1 317 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ARMC6Q6NXE6 501 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC48A1Q6P1K1 146 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 C1orf216Q8TAB5 229 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SUN3Q8TAQ9 357 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 RERGQ96A58 199 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 TAMM41Q96BW9 452 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SDCCAG3Q96C92 435 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SPACA7Q96KW9 195 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 RAD21L1Q9H4I0 556 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 FAM60AQ9NP50 221 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 CES1P1Q9UKY3 287 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 CTSBP07858 339 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 PRKAG1P54619 331 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC36A3Q495N2 470 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 RPS26P11Q5JNZ5 115 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 KRT80Q6KB66 452 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SMYD1Q8NB12 490 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 BARD1Q99728 777 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 SERHL2Q9H4I8 314 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ANKRA2Q9H9E1 313 aa21.2■□□□□ 0.98
PDLIM2-203ENST00000339162 ARAFP10398 606 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 OR1E2P47887 323 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 RBBP4Q09028 425 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 GPR19Q15760 415 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 GKN2Q86XP6 184 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 OFCC1Q8IZS5 231 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 DOHHQ9BU89 302 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 C8orf4Q9NR00 106 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 UCKL1Q9NWZ5 548 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 BCHEP06276 602 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 PPM1FP49593 454 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 VSX2P58304 361 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 SELENOWP63302 87 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 RUNX2Q13950 521 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 SUZ12Q15022 739 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 ZNF630Q2M218 657 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 OR2T5Q6IEZ7 315 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 IQCHQ86VS3 1027 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 DHRSXQ8N5I4 330 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 CAMKVQ8NCB2 501 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 OR5D16Q8NGK9 328 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 OR2T29Q8NH02 315 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 SPPL2AQ8TCT8 520 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 KLHL6Q8WZ60 621 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 POP5Q969H6 163 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 CSF3RQ99062 836 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 ZCCHC3Q9NUD5 404 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 THEGQ9P2T0 379 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 RAB23Q9ULC3 237 aa21.19■□□□□ 0.98
PDLIM2-203ENST00000339162 SEC24DO94855 1032 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 UBXN7O94888 489 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 SMIM10L1P0DMW3 83 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 NXPH1P58417 271 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 BIRC2Q13490 618 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 MLC1Q15049 377 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 TMEM107Q6UX40 140 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 CEP68Q76N32 757 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 PSMA8Q8TAA3 256 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC38A5Q8WUX1 472 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 SMIM10Q96HG1 83 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 C7orf34Q96L11 122 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 YIPF4Q9BSR8 244 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 PCED1AQ9H1Q7 454 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 POMT2Q9UKY4 750 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 BAG5Q9UL15 447 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 ENTPD4Q9Y227 616 aa21.18■□□□□ 0.98
PDLIM2-203ENST00000339162 HMGN4O00479 90 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 NR2F6P10588 404 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 CDH3P22223 829 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 OR4N5Q8IXE1 308 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 OR5K1Q8NHB7 308 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 LYARQ9NX58 379 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 KLK4Q9Y5K2 254 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 CACNA1IQ9P0X4 2223 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 AQP9O43315 295 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 NME6O75414 186 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 CPN2P22792 545 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 SIM1P81133 766 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 RNF44Q7L0R7 432 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 RBM12BQ8IXT5 1001 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms