RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 A0A1W2PRS3 328 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 KIR3DP1A8MWS1 328 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 AHRRA9YTQ3 701 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 SYT5O00445 386 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 DVL2O14641 736 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 TAPBPO15533 448 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 CCL3P10147 92 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 STMN1P16949 149 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 UQCRC1P31930 480 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 CASP2P42575 452 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 SSR2P43308 183 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 RPL21P46778 160 aaKnown RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 STT3AP46977 705 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 SLAMF1Q13291 335 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 TGIF2LYQ8IUE0 185 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 KLHL7Q8IXQ5 586 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 CMTM7Q96FZ5 175 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 PWWP2AQ96N64 755 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 RPF2Q9H7B2 306 aaKnown RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ACKR4Q9NPB9 350 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 CCM2LQ9NUG4 571 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-202ENST00000338995 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 ABCA4P78363 2273 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 AKAP9Q99996 3911 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 MTORP42345 2549 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TP53I11O14683 189 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 ETHE1O95571 254 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TBX6O95947 436 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TGFB1P01137 390 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PCNAP12004 261 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PIGAP37287 484 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 DGKQP52824 942 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 DLX5P56178 289 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PLIN5Q00G26 463 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF791Q3KP31 576 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TBCELQ5QJ74 424 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 LRRC70Q7Z2Q7 622 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 FAM13CQ8NE31 585 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 STAG3L4Q8TBR4 150 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 FAM222BQ8WU58 562 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 RGMAQ96B86 450 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 CD244Q9BZW8 370 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
COMMD4-202ENST00000338995 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
COMMD4-202ENST00000338995 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 OR10H2O60403 315 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 SEC31AO94979 1220 aaKnown RBP13.1□□□□□ -0.31
COMMD4-202ENST00000338995 IL2RAP01589 272 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 CELA3AP09093 270 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 CD1DP15813 335 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 KLK2P20151 261 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 ADH7P40394 386 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-202ENST00000338995 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 PHEXP78562 749 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 ID2Q02363 134 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 UBE3DQ7Z6J8 389 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 GPR180Q86V85 440 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 PM20D2Q8IYS1 436 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 ZBED8Q8IZ13 594 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 SPATA6LQ8N4H0 392 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms