RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 IL26Q9NPH9 171 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 MLXQ9UH92 298 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 MEMO1Q9Y316 297 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 ACTL7AQ9Y615 435 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SCAMP2O15127 329 aaKnown RBP13.17□□□□□ -0.3
RTN4-202ENST00000337526 SLC16A8O95907 504 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 CYB5AP00167 134 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 MAPK3P27361 379 aaPredicted RBP13.17□□□□□ -0.3
RTN4-202ENST00000337526 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
RTN4-202ENST00000337526 GPR150Q8NGU9 434 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
RTN4-202ENST00000337526 C3orf30Q96M34 536 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SLC12A9Q9BXP2 914 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SEC61A2Q9H9S3 476 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 CHMP1AQ9HD42 196 aaPredicted RBP13.17□□□□□ -0.3
RTN4-202ENST00000337526 KAT7O95251 611 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 LCKP06239 509 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 GNAO1P09471 354 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 EPCAMP16422 314 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 PTGS2P35354 604 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SOX2P48431 317 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SLAMF1Q13291 335 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 PROX2Q3B8N5 592 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 SPAG16Q8N0X2 631 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 NUP43Q8NFH3 380 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
RTN4-202ENST00000337526 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF726A6NNF4 738 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 M0QZQ0 153 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 FHP07954 510 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 RUNDC3AQ59EK9 446 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PLEKHG7Q6ZR37 379 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 DENND6BQ8NEG7 585 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 FANK1Q8TC84 345 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 NSMAFQ92636 917 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 AGPAT4Q9NRZ5 378 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 B4GAT1O43505 415 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 SLC19A2O60779 497 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 RPS17P08708 135 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 GADD45AP24522 165 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 LCN1P31025 176 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 CNR2P34972 360 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 NXPE4Q6UWF7 544 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 NRROSQ86YC3 692 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ARHGAP12Q8IWW6 846 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 C7orf61Q8IZ16 206 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TEX26Q8N6G2 289 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ACBD7Q8N6N7 88 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 OR52N2Q8NGI0 321 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 SETD7Q8WTS6 366 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 TRIB2Q92519 343 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 INPP5KQ9BT40 448 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TREX1Q9NSU2 369 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ERVK-11Q9UQG0 969 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PCDHGA2Q9Y5H1 932 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ENPP4Q9Y6X5 453 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TCRBV3S1A0A5B6 114 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TNFP01375 233 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 TNFRSF1BP20333 461 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 KCNC1P48547 511 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF267Q14586 743 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 IER5LQ5T953 404 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 CEACAM19Q7Z692 300 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PNLDC1Q8NA58 520 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 SPERTQ8NA61 448 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PLA2G15Q8NCC3 412 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 THAP6Q8TBB0 222 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 GATAD2BQ8WXI9 593 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 HDHD5Q9BXW7 423 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TMEM45AQ9NWC5 275 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ABCG2Q9UNQ0 655 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ANHXE9PGG2 379 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 EIF3FO00303 357 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 EMC8O43402 210 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ADAP00813 363 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF865P0CJ78 1059 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 HOXB2P14652 356 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 TYRP1P17643 537 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms