RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NPRL3Q12980 569 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 IRF4Q15306 451 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 AMHR2Q16671 573 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SYPL2Q5VXT5 272 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 DPP10Q8N608 796 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 LRRC52Q8N7C0 313 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 WDSUB1Q8N9V3 476 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR4F6Q8NGB9 312 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR2T35Q8NGX2 323 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ULK4Q96C45 1275 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PITX2Q99697 317 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 RHBGQ9H310 441 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 DDX31Q9H8H2 851 aaKnown RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SEBOXQ9HB31 216 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ING1Q9UK53 422 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 IKZF3Q9UKT9 509 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SCN1AP35498 2009 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 EVPLQ92817 2033 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 M0R129 80 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 GFRA2O00451 464 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 HBP1O60381 514 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SLC22A3O75751 556 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 HOXB6P17509 224 aaKnown RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SPAM1P38567 509 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SSPNQ14714 243 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 C3orf33Q6P1S2 294 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 CNIH2Q6PI25 160 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SCIMPQ6UWF3 145 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF548Q8NEK5 533 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SLC25A46Q96AG3 418 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SCMH1Q96GD3 660 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 PPP1R3EQ9H7J1 279 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 HHATLQ9HCP6 504 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 DHCR7Q9UBM7 475 aaKnown RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 RNF215Q9Y6U7 377 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 C7orf66A4D0T2 115 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 OR6C68A6NDL8 312 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 OR6C75A6NL08 312 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 M0QYT0 321 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 GPR31O00270 319 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 CXCR6O00574 342 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 GJB1P08034 283 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 IQCF3P0C7M6 154 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SPI1P17947 270 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 VEGFCP49767 419 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 TSPAN5P62079 268 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 IL18Q14116 193 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 FAM198BQ6UWH4 519 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 SLC9B2Q86UD5 537 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 LDLRAD3Q86YD5 345 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 EIF4E3Q8N5X7 224 aaKnown RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 BMPERQ8N8U9 685 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 UXS1Q8NBZ7 420 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 KCNC2Q96PR1 638 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ALX4Q9H161 411 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 NT5DC2Q9H857 520 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-201ENST00000328923 LATS2Q9NRM7 1088 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 PIGVQ9NUD9 493 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 PLCXD1Q9NUJ7 323 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 ZIM2Q9NZV7 527 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
SHMT2-201ENST00000328923 GPR171O14626 319 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-201ENST00000328923 RECKO95980 971 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 ZDHHC11BP0C7U3 371 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 CXCL2P19875 107 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 LCN1P31025 176 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 CRYBB2P43320 205 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 GPR176Q14439 515 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 UAP1L1Q3KQV9 507 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF628Q5EBL2 1059 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 FAM109BQ6ICB4 259 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-201ENST00000328923 POMZP3Q6PJE2 187 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 RAB44Q7Z6P3 723 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 OR52E4Q8NGH9 312 aa11.31□□□□□ -0.6
SHMT2-201ENST00000328923 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
SHMT2-201ENST00000328923 POP5Q969H6 163 aaKnown RBP11.31□□□□□ -0.6
SHMT2-201ENST00000328923 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms