RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TBCELQ5QJ74 424 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 OR4C11Q6IEV9 310 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 TRIM40Q6P9F5 258 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 SLCO6A1Q86UG4 719 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 FAM120BQ96EK7 910 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 KCNC2Q96PR1 638 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 PRDM7Q9NQW5 492 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 FGF21Q9NSA1 209 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 CNOT11Q9UKZ1 510 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 DTNAQ9Y4J8 743 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 SPAARA0A1B0GVQ0 90 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 HYAL3O43820 417 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 GFRA3O60609 400 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 MED26O95402 600 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 RPSAP08865 295 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 MSL3P1P0C860 447 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SMIM10L1P0DMW3 83 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 FCGR1AP12314 374 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SSR2P43308 183 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 ARFIP1P53367 373 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 TAS2R50P59544 299 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 MANEAQ5SRI9 462 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 ERMP1Q7Z2K6 904 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SERPINA11Q86U17 422 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 MICU2Q8IYU8 434 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 OR8K5Q8NH50 307 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 LRTOMTQ8WZ04 291 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF501Q96CX3 271 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SMIM10Q96HG1 83 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SIDT1Q9NXL6 827 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 SH3BP4Q9P0V3 963 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 ANAPC2Q9UJX6 822 aa17.74■□□□□ 0.43
EXOSC3-201ENST00000327304 CLIC1O00299 241 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 TXNDC9O14530 226 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 GSTA4O15217 222 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 OR2B3O76000 313 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 SCELO95171 688 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 PPIBP23284 216 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 SFT2D3Q587I9 215 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 TCTE1Q5JU00 501 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 CCNYL2Q5T2Q4 361 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 CDCP2Q5VXM1 449 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 ANKRD26P1Q6NSI1 321 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 DHRS13Q6UX07 377 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 PRSS41Q7RTY9 318 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 NUDT13Q86X67 352 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 CLECL1Q8IZS7 167 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 GOT1L1Q8NHS2 421 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 NETO1Q8TDF5 533 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 PPCDCQ96CD2 204 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 REXO5Q96IC2 774 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 C10orf90Q96M02 699 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 TBCDQ9BTW9 1192 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 DDX31Q9H8H2 851 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 OCIAD1Q9NX40 245 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 AURKCQ9UQB9 309 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 PTPRZ1P23471 2315 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 CEP250Q9BV73 2442 aa17.73■□□□□ 0.43
EXOSC3-201ENST00000327304 ARHGAP10A1A4S6 786 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 FITM1A5D6W6 292 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 URADA6NGE7 173 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 TM4SF5O14894 197 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 TBX19O60806 448 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 BMP2P12643 396 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 DDX5P17844 614 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ALOX12P18054 663 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 GPX2P18283 190 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ATP5A1P25705 553 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CERS1P27544 350 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CSTF2P33240 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 BTN3A2P78410 334 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 TGM3Q08188 693 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 DEFB134Q4QY38 66 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF621Q6ZSS3 439 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ABHD13Q7L211 337 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 GPR155Q7Z3F1 870 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 NATD1Q8N6N6 113 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 SRFBP1Q8NEF9 429 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 AURKBQ96GD4 344 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 BTBD9Q96Q07 612 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 OR6C1Q96RD1 312 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF282Q9UDV7 671 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CORO2BQ9UQ03 480 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 SCN3AQ9NY46 2000 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 A0A0A6YYD5 115 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 TMPRSS11DO60235 418 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CPSF4O95639 269 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 IL1RNP18510 177 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CSRP1P21291 193 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 HIST1H1TP22492 207 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 CCKBRP32239 447 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 MAPK12P53778 367 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ITGA1P56199 1179 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 TRA2BP62995 288 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ACY1Q03154 408 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF385BQ569K4 471 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 PRAMEF17Q5VTA0 474 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ANKFN1Q8N957 763 aa17.72■□□□□ 0.43
EXOSC3-201ENST00000327304 ACOT4Q8N9L9 421 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms