RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PKMP14618 531 aaKnown RBP6.17□□□□□ -1.42
CSTF3-201ENST00000323959 BGNP21810 368 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 CRYGSP22914 178 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 CD96P40200 585 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 SLC1A6P48664 564 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ATP4BP51164 291 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 CLCN7P51798 805 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 PRKAA1Q13131 559 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF658BQ4V348 819 aaPredicted RBP6.17□□□□□ -1.42
CSTF3-201ENST00000323959 CTSL3PQ5NE16 218 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 AP1ARQ63HQ0 302 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 TTC19Q6DKK2 380 aaPredicted RBP6.17□□□□□ -1.42
CSTF3-201ENST00000323959 TBC1D1Q86TI0 1168 aaPredicted RBP6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ISCA2Q86U28 154 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 TRAM1L1Q8N609 369 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ARIH2OSQ8N7S6 290 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF611Q8N823 705 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 OR4K2Q8NGD2 314 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 GDAP1Q8TB36 358 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 MAGEC3Q8TD91 643 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ATOH8Q96SQ7 321 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ELAC2Q9BQ52 826 aaKnown RBP6.17□□□□□ -1.42
CSTF3-201ENST00000323959 HES7Q9BYE0 225 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF385DQ9H6B1 395 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 KLC4Q9NSK0 619 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 SLC39A10Q9ULF5 831 aa6.17□□□□□ -1.42
CSTF3-201ENST00000323959 LOC102723996A0A087X1L8 192 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 A0A1B0GX78 115 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SYCE1LA8MT33 242 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CAPN14A8MX76 684 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SRP72O76094 671 aaKnown RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SERPINA6P08185 405 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF7P17097 686 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ITGALP20701 1170 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CEACAM8P31997 349 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 MC4RP32245 332 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ARFIP2P53365 341 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SLC12A2P55011 1212 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SP140Q13342 867 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CTBP1Q13363 440 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 HERC3Q15034 1050 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CHI3L2Q15782 390 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ACER2Q5QJU3 275 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 VASNQ6EMK4 673 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 EPGNQ6UW88 154 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 USP43Q70EL4 1123 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 COX15Q7KZN9 410 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 HSD11B1LQ7Z5J1 315 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 FBXO15Q8NCQ5 510 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 DDHD1Q8NEL9 900 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ACVR1CQ8NER5 493 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 OR13C4Q8NGS5 318 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 BLOC1S5Q8TDH9 187 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 AP2M1Q96CW1 435 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ABCG8Q9H221 673 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 TRIM45Q9H8W5 580 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 PIH1D1Q9NWS0 290 aaKnown RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ZDHHC3Q9NYG2 299 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 PKD2L2Q9NZM6 624 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SLC17A6Q9P2U8 582 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CAPN7Q9Y6W3 813 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 GOLGA8QA0A0J9YX86 632 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 GOLGA8OA6NCC3 632 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 GOLGA8NF8WBI6 632 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 OVOL3O00110 214 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 PRMT5O14744 637 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 GPRIN2O60269 458 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CDC40O60508 579 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 VPS26AO75436 327 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ENO3P13929 434 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CXCR2P25025 360 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SPINT3P49223 89 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CDKN2DP55273 166 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 PTSQ03393 145 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 HENMT1Q5T8I9 393 aaKnown RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF585AQ6P3V2 769 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC121Q6ZUS5 278 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 FRMD7Q6ZUT3 714 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 IL17RELQ6ZVW7 336 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CMC1Q7Z7K0 106 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 C10orf107Q8IVU9 208 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 WDR75Q8IWA0 830 aaKnown RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC63Q8NA47 563 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 PDPRQ8NCN5 879 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 CD200R1Q8TD46 325 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ACTRT2Q8TDY3 377 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 SCYL1Q96KG9 808 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 LINC00615Q96LM1 132 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ZSCAN5AQ9BUG6 496 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 RSPO3Q9BXY4 272 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ZCCHC2Q9C0B9 1178 aaKnown RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 LRMDAQ9H2I8 198 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 MMADHCQ9H3L0 296 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 OSGEPL1Q9H4B0 414 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 FBXO6Q9NRD1 293 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-201ENST00000323959 ENAMQ9NRM1 1142 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 NUDT4Q9NZJ9 180 aa6.16□□□□□ -1.42
CSTF3-201ENST00000323959 RUVBL2Q9Y230 463 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms