RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DLGAP1O14490 977 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 CLOCKO15516 846 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 NME6O75414 186 aaPredicted RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 FKBP9O95302 570 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 LDLRP01130 860 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 UQCRBP14927 111 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 OR1D5P58170 312 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 MRPS35P82673 323 aaKnown RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 TGM3Q08188 693 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 VEZF1Q14119 521 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 SUZ12Q15022 739 aaKnown RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 GPR19Q15760 415 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 C6orf52Q5T4I8 152 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 TMEM154Q6P9G4 183 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 ZBTB49Q6ZSB9 765 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 WDR5BQ86VZ2 330 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 OR4N5Q8IXE1 308 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 TMEM52Q8NDY8 209 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 NFKBIDQ8NI38 313 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 PYURFQ96I23 114 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 VPS50Q96JG6 964 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 MAGED4Q96JG8 741 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 LRIT1Q9P2V4 623 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 DAPP1Q9UN19 280 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 OPN1SWP03999 348 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 NR2F6P10588 404 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 PCGF2P35227 344 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 CFHR1Q03591 330 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 GK3PQ14409 553 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 TMTC4Q5T4D3 741 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 GCNT6Q5T4J0 391 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 C6orf120Q7Z4R8 191 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 GATAD2AQ86YP4 633 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 C11orf65Q8NCR3 313 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 RAB8BQ92930 207 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 OTUB1Q96FW1 271 aaPredicted RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 BBS4Q96RK4 519 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 SERINC2Q96SA4 455 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 NEUROD4Q9HD90 331 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 KLHL3Q9UH77 587 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 PADI4Q9UM07 663 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 NAALAD2Q9Y3Q0 740 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 TNRC6BQ9UPQ9 1833 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 UNC13CQ8NB66 2214 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 WDFY3Q8IZQ1 3526 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 MYOCOSA0A1B0GUC4 107 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 LAMTOR5O43504 91 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 PRSS23O95084 383 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 FCGR1AP12314 374 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 CCT3P49368 545 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 PPM1FP49593 454 aaPredicted RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 FADDQ13158 208 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 TP53BP2Q13625 1128 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 SPIDRQ14159 915 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 MLC1Q15049 377 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 LTB4RQ15722 352 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 PLK5Q496M5 336 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 C6orf132Q5T0Z8 1188 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 PPP4R4Q6NUP7 873 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 MCATQ8IVS2 390 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 ZC3H7AQ8IWR0 971 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 DNAJC22Q8N4W6 341 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 CATSPER1Q8NEC5 780 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 NCSTNQ92542 709 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 ELF4Q99607 663 aaPredicted RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 RSPO3Q9BXY4 272 aaPredicted RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 LYARQ9NX58 379 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 PILRBQ9UKJ0 227 aa17.38■□□□□ 0.37
USP39-201ENST00000323701 CNOT11Q9UKZ1 510 aaKnown RBP17.38■□□□□ 0.37
USP39-201ENST00000323701 A0A1B0GTW7 788 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 FAM227AF5H4B4 570 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 ZSCAN9O15535 394 aaPredicted RBP17.37■□□□□ 0.37
USP39-201ENST00000323701 TNFRSF17Q02223 184 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 SCARB2Q14108 478 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 SIM2Q14190 667 aaPredicted RBP17.37■□□□□ 0.37
USP39-201ENST00000323701 MAPK11Q15759 364 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 CEACAM20Q6UY09 585 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 CBLL1Q75N03 491 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 ABHD13Q7L211 337 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 C1orf210Q8IVY1 113 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 HS3ST5Q8IZT8 346 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 NATD1Q8N6N6 113 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 TMEM105Q8N8V8 129 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 ZNF597Q96LX8 424 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 CCDC3Q9BQI4 270 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 SPATA9Q9BWV2 254 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.37■□□□□ 0.37
USP39-201ENST00000323701 ERVMER34-1Q9H9K5 563 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 ABCG2Q9UNQ0 655 aa17.37■□□□□ 0.37
USP39-201ENST00000323701 RHPN2P1A8MT19 583 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SGK494L7N484 410 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TXNDC9O14530 226 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 B3GALT2O43825 422 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 GUCY1B2O75343 617 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 KRT75O95678 551 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SEMG1P04279 462 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 CPN2P22792 545 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 PRIM2P49643 509 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 VLDLRP98155 873 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms