RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 C17orf105B2RV13 164 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 CLDN4O14493 209 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 SKAP2O75563 359 aaPredicted RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 DDAH2O95865 285 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 UQCRHP07919 91 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 IL10P22301 178 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ALDH9A1P49189 494 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 MAPK12P53778 367 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 PKNOX1P55347 436 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 TGM3Q08188 693 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 CHI3L2Q15782 390 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 TTMPQ5BVD1 217 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ANKRD26P1Q6NSI1 321 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ISLR2Q6UXK2 745 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 SRFBP1Q8NEF9 429 aaKnown RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ADCY4Q8NFM4 1077 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 CLHC1Q8NHS4 586 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 GFM2Q969S9 779 aaKnown RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 C11orf24Q96F05 449 aaPredicted RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 PGM2Q96G03 612 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 VTI1BQ9UEU0 232 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 BAIAP2L1Q9UHR4 511 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ADGRE2Q9UHX3 823 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 A0A088AWK7 358 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SORBS2O94875 1100 aaKnown RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 KRT6AP02538 564 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 KRT6BP04259 564 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 IL3P08700 152 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 DHRS4L1P0CG22 281 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 NR2F6P10588 404 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 TNNI3P19429 210 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF10P21506 573 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SERPINB1P30740 379 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SSTR4P31391 388 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 KRT6CP48668 564 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 TAS2R50P59544 299 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SKP1P63208 163 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 PHEXP78562 749 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 MFAP5Q13361 173 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 RFTN2Q52LD8 501 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 ACER2Q5QJU3 275 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SH2D4BQ5SQS7 431 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 FAM111BQ6SJ93 734 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 IGFL2Q6UWQ7 119 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 TMEM64Q6YI46 380 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 CCDC126Q96EE4 140 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 MMP25Q9NPA2 562 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 KLHL1Q9NR64 748 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 ASF1BQ9NVP2 202 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 C19orf25Q9UFG5 118 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF451Q9Y4E5 1061 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 MMACHCQ9Y4U1 282 aa11.22□□□□□ -0.61
SCFD1-201ENST00000311943 HEMK1Q9Y5R4 338 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-201ENST00000311943 WWP2O00308 870 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 AZIN1O14977 448 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 PIP5K1BO14986 540 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 PCDH7O60245 1069 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 ERAL1O75616 437 aaKnown RBP11.21□□□□□ -0.61
SCFD1-201ENST00000311943 SEMA3DO95025 777 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CLPSP04118 112 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CD96P40200 585 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CASRP41180 1078 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 KIAA0040Q15053 153 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 KANK2Q63ZY3 851 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 DESI1Q6ICB0 168 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 LRIG3Q6UXM1 1119 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 Q6ZS92 163 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 NUDCD3Q8IVD9 361 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 B3GNT7Q8NFL0 401 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 OR1N1Q8NGS0 311 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 SLC2A12Q8TD20 617 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF721Q8TF20 911 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CNRIP1Q96F85 164 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-201ENST00000311943 TAAR6Q96RI8 345 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CNPPD1Q9BV87 410 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 SLC29A3Q9BZD2 475 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 BRF2Q9HAW0 419 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CES1P1Q9UKY3 287 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 B3GNT3Q9Y2A9 372 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 DTX4Q9Y2E6 619 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 SHANK1Q9Y566 2161 aa11.21□□□□□ -0.61
SCFD1-201ENST00000311943 CRCPO75575 148 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 ALPPP05187 535 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 SFTPCP11686 197 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 EFNA1P20827 205 aaPredicted RBP11.21□□□□□ -0.62
SCFD1-201ENST00000311943 ERVK-8P63133 956 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 ARG2P78540 354 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.62
SCFD1-201ENST00000311943 RCN2Q14257 317 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 MDGA2Q7Z553 956 aa11.21□□□□□ -0.62
SCFD1-201ENST00000311943 M1APQ8TC57 530 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms