RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 BRINP2Q9C0B6 783 aa9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 MVB12BQ9H7P6 319 aa9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 NIPAL2Q9H841 368 aa9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 UNKLQ9H9P5 680 aaKnown RBP9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 CARS2Q9HA77 564 aaKnown RBP9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 SPHK1Q9NYA1 384 aa9.11□□□□□ -0.95
RBFOX1-201ENST00000311745 MN1Q10571 1320 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 PNMA8CA0A1B0GUJ8 204 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 DHRS12A0PJE2 317 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RFPL3O75679 317 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SRP72O76094 671 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ALPLP05186 524 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SNRPB2P08579 225 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 EPORP19235 508 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RFX2P48378 723 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 WDR5P61964 334 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 EMX1Q04741 257 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 LMAN2Q12907 356 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 LCP2Q13094 533 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 KIAA0040Q15053 153 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RAET1GQ6H3X3 334 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RFLNAQ6ZTI6 216 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 USP45Q70EL2 814 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 TRMT11Q7Z4G4 463 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 C12orf40Q86WS4 652 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 DCAF4L2Q8NA75 395 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 KDF1Q8NAX2 398 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ZPBPQ9BS86 351 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 IL1RAPQ9NPH3 570 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 IL26Q9NPH9 171 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SEMA4BQ9NPR2 832 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 CCL26Q9Y258 94 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 C2orf16Q68DN1 1984 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 LOC390937A0A1W2PQ73 354 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 TGM5O43548 720 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SIGLEC6O43699 453 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ERN1O75460 977 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 FHP07954 510 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 XKP51811 444 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SLC7A9P82251 487 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 MAB21L1Q13394 359 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 OR2B11Q5JQS5 317 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 TSPAN33Q86UF1 283 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 GPALPP1Q8IXQ4 340 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RYBPQ8N488 228 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 DPP10Q8N608 796 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 CHDHQ8NE62 594 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 NSMAFQ92636 917 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ECHDC3Q96DC8 303 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ART5Q96L15 291 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 OR51M1Q9H341 326 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 PIGUQ9H490 435 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 TAS2R13Q9NYV9 303 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 SLAMF8Q9P0V8 285 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 RAPGEFL1Q9UHV5 662 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 ELF5Q9UKW6 265 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 CLCA3PQ9Y6N3 262 aa9.1□□□□□ -0.95
RBFOX1-201ENST00000311745 A0A1W2PPL8 197 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 hCG_1807616A0A1W2PRN6 198 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 UBA6A0AVT1 1052 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 SYNDIG1LA6NDD5 238 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 RECQL5O94762 991 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 HTR1AP08908 422 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 BPIP17213 487 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 CSNK1DP48730 415 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 HTR6P50406 440 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 CARD18P57730 90 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 SPCS3P61009 180 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 RAC1P63000 192 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 HOXC5Q00444 222 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 LIPEQ05469 1076 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 POU4F2Q12837 409 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 CCDC85BQ15834 202 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 AP5B1Q2VPB7 878 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 PAGE3Q5JUK9 113 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 SLC25A25Q6KCM7 469 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 ATCAYQ86WG3 371 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 PACRGLQ8N7B6 248 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 WDSUB1Q8N9V3 476 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 STAG3L4Q8TBR4 150 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 LINGO1Q96FE5 620 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 ACOX2Q99424 681 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 TREX2Q9BQ50 279 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 TBCDQ9BTW9 1192 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 SMG9Q9H0W8 520 aaKnown RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 FAM212BQ9NTI7 297 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 AIG1Q9NVV5 245 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 SAGE1Q9NXZ1 904 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 FBXL2Q9UKC9 423 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 USP22Q9UPT9 525 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 DHRS7Q9Y394 339 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
RBFOX1-201ENST00000311745 A0A0J9YYE9 177 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms