RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 AP1M2Q9Y6Q5 423 aa24.08■■□□□ 1.44
HOXB3-201ENST00000311626 ANHXE9PGG2 379 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 TLR4O00206 839 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 RPL3P39023 403 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 SYPL1Q16563 259 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 PLAG1Q6DJT9 500 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 C11orf74Q86VG3 221 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 ATCAYQ86WG3 371 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 MMAAQ8IVH4 418 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 SLC34A3Q8N130 599 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 TFGQ92734 400 aaPredicted RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 ITPKCQ96DU7 683 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 MAPKAP1Q9BPZ7 522 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 LGR4Q9BXB1 951 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 ZCCHC2Q9C0B9 1178 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 MVB12BQ9H7P6 319 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 REV1Q9UBZ9 1251 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 RFXAPO00287 272 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 TNNI3P19429 210 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 EPHA5P54756 1037 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 PIN1Q13526 163 aaPredicted RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 FBXO43Q4G163 708 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 C9orf64Q5T6V5 341 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 MRPL43Q8N983 215 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 APOBEC4Q8WW27 367 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 YIPF4Q9BSR8 244 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 NXF2Q9GZY0 626 aaKnown RBP24.07■■□□□ 1.44
HOXB3-201ENST00000311626 EPHX3Q9H6B9 360 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 KCNK12Q9HB15 430 aa24.07■■□□□ 1.44
HOXB3-201ENST00000311626 GLOD5A6NK44 160 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 TMPRSS11DO60235 418 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 MFN2O95140 757 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 SRPRAP08240 638 aaKnown RBP24.06■■□□□ 1.44
HOXB3-201ENST00000311626 ADRB3P13945 408 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 DDCP20711 480 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 LIMK1P53667 647 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 LRRC26Q2I0M4 334 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 OR2L2Q8NH16 312 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 CRELD1Q96HD1 420 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 UCK2Q9BZX2 261 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 SERHL2Q9H4I8 314 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 PRAMEF27A3QJZ7 478 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 M0R3H8 397 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 TAF4O00268 1085 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 LATO43561 262 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 MAPK9P45984 424 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 EIF4HQ15056 248 aaKnown RBP24.06■■□□□ 1.44
HOXB3-201ENST00000311626 KHDRBS2Q5VWX1 349 aaKnown RBP24.06■■□□□ 1.44
HOXB3-201ENST00000311626 ZNF367Q7RTV3 350 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 OPALINQ96PE5 141 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 NUAK2Q9H093 628 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 ANKHQ9HCJ1 492 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 SPATA7Q9P0W8 599 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 TMCC3Q9ULS5 477 aa24.06■■□□□ 1.44
HOXB3-201ENST00000311626 EFCAB10A6NFE3 127 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 HMGN4O00479 90 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 SNPHO15079 494 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PDPK1O15530 556 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 OR12D1P0DN82 309 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 ELAVL4P26378 380 aaKnown RBP24.05■■□□□ 1.44
HOXB3-201ENST00000311626 BSGP35613 385 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 ZNF181Q2M3W8 571 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 SAXO2Q658L1 398 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PNCKQ6P2M8 343 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 C17orf64Q86WR6 236 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 KRT78Q8N1N4 520 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 CELF2-AS1Q8N7Q2 184 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 TCEANCQ8N8B7 351 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 FAM46DQ8NEK8 389 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 XAGE5Q8WWM1 108 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 TRMT61AQ96FX7 289 aaKnown RBP24.05■■□□□ 1.44
HOXB3-201ENST00000311626 LRIG1Q96JA1 1093 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 LHX9Q9NQ69 397 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PCDHGB6Q9Y5F9 930 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 SLC28A2O43868 658 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 APOL3O95236 402 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PRNPP04156 253 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PCCBP05166 539 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 MADCAM1Q13477 382 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 ELOAQ14241 798 aaKnown RBP24.05■■□□□ 1.44
HOXB3-201ENST00000311626 KCNJ8Q15842 424 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 MTERF3Q96E29 417 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 NEURL3Q96EH8 262 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 CDCA4Q9BXL8 241 aa24.05■■□□□ 1.44
HOXB3-201ENST00000311626 SIRT3Q9NTG7 399 aaPredicted RBP24.05■■□□□ 1.44
HOXB3-201ENST00000311626 PNMA8CA0A1B0GUJ8 204 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 VEGFBP49765 207 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 PRKAG1P54619 331 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 TARDBPQ13148 414 aaKnown RBP eCLIP24.04■■□□□ 1.448e-7■■■■■ 37.6
HOXB3-201ENST00000311626 NUMA1Q14980 2115 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 DCST1Q5T197 706 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 GDPD3Q7L5L3 318 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 ADCK2Q7Z695 626 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 POF1BQ8WVV4 589 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 RAD51AP1Q96B01 352 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 PRR14Q9BWN1 585 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 HHATLQ9HCP6 504 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 SEMA3GQ9NS98 782 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 CCDC59Q9P031 241 aaKnown RBP24.04■■□□□ 1.44
HOXB3-201ENST00000311626 MARK1Q9P0L2 795 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms