RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ASB12Q8WXK4 309 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 ZNF726A6NNF4 738 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 ZNF878C9JN71 531 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 FAM72CH0Y354 149 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 BCAS1O75363 584 aaPredicted RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 ADAP00813 363 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CHMP24386 653 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 DGKEP52429 567 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 NTRK2Q16620 822 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 FAM72AQ5TYM5 149 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 FAM72DQ6L9T8 149 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 FAM72BQ86X60 149 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 MS4A15Q8N5U1 240 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 ASB15Q8WXK1 588 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 DPF3Q92784 378 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 HERPUD2Q9BSE4 406 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 BEX2Q9BXY8 128 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GORASP2Q9H8Y8 452 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 TMEM14AQ9Y6G1 99 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 RORAP35398 523 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GRHPRQ9UBQ7 328 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 PIGBOS1A0A0B4J2F0 54 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 JRKO75564 520 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 PAHP00439 452 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 EIF2S3P41091 472 aaKnown RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 BDKRB1P46663 353 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 KCNC1P48547 511 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 HK3P52790 923 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GHRHRQ02643 423 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GATAD2BQ8WXI9 593 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 TMEM125Q96AQ2 219 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CSTBP04080 98 aaKnown RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 OCLNQ16625 522 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 DECR1Q16698 335 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 PCTPQ9UKL6 214 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 KNTC1P50748 2209 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 VILLO15195 856 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GTF2F2P13984 249 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 FAM198BQ6UWH4 519 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 Q6ZVU0 165 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GPR17Q13304 367 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 NSMAFQ92636 917 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 SYT11Q9BT88 431 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CACNG6Q9BXT2 260 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 ARL6Q9H0F7 186 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 GPR83Q9NYM4 423 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 INTS6Q9UL03 887 aaKnown RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 PPM1BO75688 479 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 OAZ2O95190 189 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 PCBP2Q15366 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNED1-201ENST00000310397 ANKRD54Q6NXT1 300 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 C14orf80Q86SX3 495 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 FBXO15Q8NCQ5 510 aaPredicted RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 BRF2Q9HAW0 419 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 DCAF13Q9NV06 445 aaKnown RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 COL2A1P02458 1487 aaPredicted RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 F2P00734 622 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ACP5P13686 325 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 TMEM115Q12893 351 aaPredicted RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 UPP1Q16831 310 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 SLC35F1Q5T1Q4 408 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 MANEALQ5VSG8 457 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 SPARTQ8N0X7 666 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 FUBP1Q96AE4 644 aaKnown RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 SLC29A1Q99808 456 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ACTL8Q9H568 366 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ITGAMP11215 1152 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 S100A10P60903 97 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 GSTM4Q03013 218 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 CGB2Q6NT52 195 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 TESCQ96BS2 214 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ZBTB20Q9HC78 741 aaPredicted RBP12.62□□□□□ -0.39
SNED1-201ENST00000310397 CENPMQ9NSP4 180 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 SPTBP11277 2137 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 SERPINA11Q86U17 422 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 FAM86B1Q8N7N1 296 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 RAB8BQ92930 207 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 TMIGD2Q96BF3 282 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 TMEM184CQ9NVA4 438 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 TEX13CA0A0J9YWL9 993 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 ITGA5P08648 1049 aa12.62□□□□□ -0.39
SNED1-201ENST00000310397 OR12D1P0DN82 309 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms