RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR5K3A6NET4 321 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 H3BNH8 94 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 TLR4O00206 839 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 SH3BP5O60239 455 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 PRAMEF10O60809 474 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 IFNA14P01570 189 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 NME1P15531 152 aaKnown RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 RACK1P63244 317 aaKnown RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 RPL6Q02878 288 aaKnown RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 APOFQ13790 326 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 ANKRD34AQ69YU3 496 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 FRMPD2BQ6IN97 320 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 TNFAIP8L2Q6P589 184 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 PATL1Q86TB9 770 aaKnown RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 OOSP2Q86WS3 158 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 OR4N4Q8N0Y3 316 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 PJA1Q8NG27 643 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 CNRIP1Q96F85 164 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-201ENST00000309469 TBC1D17Q9HA65 648 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 PADI2Q9Y2J8 665 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 URADA6NGE7 173 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 DPM1O60762 260 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 RPL5P46777 297 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ARHGDIAP52565 204 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ITGA1P56199 1179 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SNRPNP63162 240 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 TP53BP2Q13625 1128 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SUZ12Q15022 739 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ELOCQ15369 112 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 REEP3Q6NUK4 255 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 CAMKK1Q8N5S9 505 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SPPL2AQ8TCT8 520 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 LZICQ8WZA0 190 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 RMND5BQ96G75 393 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 TOR3AQ9H497 397 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ENTPD4Q9Y227 616 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SNRNP200O75643 2136 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 H0YGG7 62 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 STK25O00506 426 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 VILLO15195 856 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 PABPC4LP0CB38 370 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ATP6V1B1P15313 513 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 PAX7P23759 505 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 DNAJA1P31689 397 aaKnown RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 RXRGP48443 463 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ARF3P61204 181 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 EPS8Q12929 822 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ZNF750Q32MQ0 723 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 CEP68Q76N32 757 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 CCDC116Q8IYX3 515 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 OFCC1Q8IZS5 231 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ARL10Q8N8L6 244 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SUN3Q8TAQ9 357 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 ZCCHC10Q8TBK6 192 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SLC38A5Q8WUX1 472 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 RERGQ96A58 199 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-201ENST00000309469 CLDN23Q96B33 292 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SERINC2Q96SA4 455 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 MIR1-1HGQ9H1L0 117 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 SEMA3GQ9NS98 782 aa20.1■□□□□ 0.81
ATG4D-201ENST00000309469 A0A1B0GTW7 788 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 HS6ST1O60243 411 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 TFAP2AP05549 437 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 TFPTP0C1Z6 253 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 TYRP1P17643 537 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 CSNK2A2P19784 350 aaPredicted RBP20.09■□□□□ 0.81
ATG4D-201ENST00000309469 ZP2Q05996 745 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 IFI44LQ53G44 452 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 ARMC6Q6NXE6 501 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 TTC33Q6PID6 262 aaPredicted RBP20.09■□□□□ 0.81
ATG4D-201ENST00000309469 TMEM64Q6YI46 380 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 RNF44Q7L0R7 432 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 SATL1Q86VE3 508 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 RAB8BQ92930 207 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 GABARAPL1Q9H0R8 117 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 REEP1Q9H902 201 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 ZCCHC3Q9NUD5 404 aaKnown RBP20.09■□□□□ 0.81
ATG4D-201ENST00000309469 GIMAP4Q9NUV9 329 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 RAB23Q9ULC3 237 aa20.09■□□□□ 0.81
ATG4D-201ENST00000309469 SAMHD1Q9Y3Z3 626 aaKnown RBP20.09■□□□□ 0.81
ATG4D-201ENST00000309469 C5orf58C9J3I9 102 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 HMGN4O00479 90 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 C8orf89P0DMQ9 161 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 NR2F6P10588 404 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 FPR1P21462 350 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 FEN1P39748 380 aaKnown RBP20.08■□□□□ 0.81
ATG4D-201ENST00000309469 PPP1CAP62136 330 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 DUSP2Q05923 314 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 DEFB134Q4QY38 66 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 ABHD13Q7L211 337 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 ZNF438Q7Z4V0 828 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 TSEN54Q7Z6J9 526 aaKnown RBP20.08■□□□□ 0.81
ATG4D-201ENST00000309469 GKN2Q86XP6 184 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 TSPAN14Q8NG11 270 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 LMX1AQ8TE12 382 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 RSC1A1Q92681 617 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 NRBF2Q96F24 287 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 MBOAT4Q96T53 435 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 BARD1Q99728 777 aaKnown RBP20.08■□□□□ 0.81
ATG4D-201ENST00000309469 SERHL2Q9H4I8 314 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms