RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 BCKDHAP12694 445 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 PRPS1L1P21108 318 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 MAOAP21397 527 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 GUCY1A3Q02108 690 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 AIMP2Q13155 320 aaKnown RBP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 ATP1A4Q13733 1029 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 DCAF10Q5QP82 559 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 C18orf63Q68DL7 685 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM71E1Q6IPT2 247 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM47EQ6ZV65 393 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 LARP4Q71RC2 724 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 ST13P4Q8IZP2 240 aaPredicted RBP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 OR14A16Q8NHC5 309 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 APOBEC4Q8WW27 367 aaKnown RBP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 DAZLQ92904 295 aaKnown RBP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 PRPF18Q99633 342 aaKnown RBP16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 ALOXE3Q9BYJ1 711 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 TRIM55Q9BYV6 548 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 MRGBPQ9NV56 204 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 FBXL4Q9UKA2 621 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 ZNF780BQ9Y6R6 833 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 LAMA5O15230 3695 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 TBX19O60806 448 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 JUNP05412 331 aaKnown RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 SLC35E2P0CK97 266 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 COX6A1P12074 109 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 SDC1P18827 310 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 CSNK2A2P19784 350 aaPredicted RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 HPCAL1P37235 193 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 STT3AP46977 705 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 HNRNPFP52597 415 aaKnown RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 C21orf58P58505 322 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 BTG2P78543 158 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 RHDQ02161 417 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 FOLH1Q04609 750 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 C2orf80Q0P641 193 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 SFT2D3Q587I9 215 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM69BQ5VUD6 431 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 IRAK1BP1Q5VVH5 260 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 IL23RQ5VWK5 629 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM219BQ5XKK7 198 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 BORAQ6PGQ7 559 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 EPGNQ6UW88 154 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 TMEM52Q8NDY8 209 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 TSLPQ969D9 159 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 ANKRD9Q96BM1 317 aaPredicted RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 ART5Q96L15 291 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 DGAT2Q96PD7 388 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 PRORYQ9H606 182 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 ATP13A2Q9NQ11 1180 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 NECTIN3Q9NQS3 549 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 RYDENQ9NUL5 291 aaKnown RBP16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 CLCA3PQ9Y6N3 262 aa16.78■□□□□ 0.28
SSSCA1-201ENST00000309328 ZNF195O14628 629 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 ZZEF1O43149 2961 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 FGF17O60258 216 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 OR10H2O60403 315 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 DIAPH2O60879 1101 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 SLITRK5O94991 958 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 IFNA16P05015 189 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 IDO1P14902 403 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 ALDH9A1P49189 494 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 SOX8P57073 446 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 DEFB109BQ30KR1 87 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 PLAG1Q6DJT9 500 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 FAAH2Q6GMR7 532 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 JMJD6Q6NYC1 403 aaPredicted RBP16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 PAPD4Q6PIY7 484 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 LIX1Q8N485 282 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 KLHL29Q96CT2 875 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 PPP1R36Q96LQ0 422 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 CCDC28BQ9BUN5 200 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 REEP4Q9H6H4 257 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 ATAD3AQ9NVI7 634 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 UTS2RQ9UKP6 389 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 CES1P1Q9UKY3 287 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 PPIEQ9UNP9 301 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 CLDN16Q9Y5I7 305 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 ZFHX4Q86UP3 3567 aa16.77■□□□□ 0.28
SSSCA1-201ENST00000309328 SCN3AQ9NY46 2000 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 SAGE2PA6NJ88 616 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 PGRMC2O15173 223 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 LDB3O75112 727 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 FURINP09958 794 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 PORP16435 677 aaPredicted RBP16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 EPHA3P29320 983 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 XKP51811 444 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 CLNS1AP54105 237 aaKnown RBP16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 FOXL2P58012 376 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 EEF1A2Q05639 463 aaKnown RBP16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 PCOLCEQ15113 449 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 GSTA3Q16772 222 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 DPY19L1Q2PZI1 675 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 CPZQ66K79 652 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 NXNQ6DKJ4 435 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms