RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 Q6ZPB1 254 aaPredicted RBP18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 OR4F6Q8NGB9 312 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 OR8K3Q8NH51 312 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 REPS1Q96D71 796 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 FRG2BQ96QU4 278 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 RASL10BQ96S79 203 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 OR8D2Q9GZM6 311 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 DEPPQ9NTK1 212 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 MS4A12Q9NXJ0 267 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 FETUBQ9UGM5 382 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 YARS2Q9Y2Z4 477 aaKnown RBP18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 A0A1B0GUH1 482 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 A0A1W2PS29 197 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNHIT1O43257 154 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 OR6B1O95007 311 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 CCNG1P51959 295 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 RAP1GDS1P52306 607 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 CDH13P55290 713 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 RNF4P78317 190 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 ALDH6A1Q02252 535 aaKnown RBP18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 HSDL2Q6YN16 418 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 SH2D5Q6ZV89 423 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 SULF2Q8IWU5 870 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 CYP4Z2PQ8N1L4 340 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 SCYL1Q96KG9 808 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 L2HGDHQ9H9P8 463 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 SEMA4BQ9NPR2 832 aaPredicted RBP18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 PHF11Q9UIL8 331 aa18.39■□□□□ 0.53
PDZRN3-202ENST00000308537 CSMD1Q96PZ7 3565 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 PINLYPA6NC86 204 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 NPIPA5E9PKD4 350 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 ASNA1O43681 348 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SLC19A2O60779 497 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SMIM24O75264 130 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 AIFM1O95831 613 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 CLPSP04118 112 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 TSPAN8P19075 237 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SOX3P41225 446 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 MEOX1P50221 254 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SSR4P51571 173 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 NR0B1P51843 470 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 C3AR1Q16581 482 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 UNC50Q53HI1 259 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 KRTCAP3Q53RY4 240 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 C9orf40Q8IXQ3 194 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 ZFP62Q8NB50 900 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 C16orf52Q8NHV5 167 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SREK1Q8WXA9 508 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 TANKQ92844 425 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 PPWD1Q96BP3 646 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 MTFMTQ96DP5 389 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 MTBPQ96DY7 904 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 CCDC120Q96HB5 630 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 FARSBQ9NSD9 589 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 LYARQ9NX58 379 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 TEX10Q9NXF1 929 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 NPIPA1Q9UND3 350 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 SPACA6W5XKT8 324 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 ABCA12Q86UK0 2595 aa18.38■□□□□ 0.53
PDZRN3-202ENST00000308537 PKDREJQ9NTG1 2253 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 A0A0G2JMM0 328 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 A0A1W2PPB8 328 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 A0A1W2PRS3 328 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 KIR3DP1A8MWS1 328 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 WWP2O00308 870 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 DLX3O60479 287 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 NADKO95544 446 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 GBAP04062 536 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 FAM58BPP0C7Q3 252 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 HSF1Q00613 529 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNF787Q6DD87 383 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 LYPD8Q6UX82 237 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 NUDT13Q86X67 352 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 ST13P4Q8IZP2 240 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 TMEM156Q8N614 296 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 PSD4Q8NDX1 1056 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 ITLN2Q8WWU7 325 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 SENP5Q96HI0 755 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 TMEM237Q96Q45 408 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 SERPINI1Q99574 410 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 CCDC77Q9BR77 488 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 CENPKQ9BS16 269 aa18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 MRPL1Q9BYD6 325 aaKnown RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 KLF13Q9Y2Y9 288 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-202ENST00000308537 TRGV8A0A0C4DH27 118 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 GLOD5A6NK44 160 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 PGRMC2O15173 223 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 PEX1O43933 1283 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 GPR75O95800 540 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 NR2F6P10588 404 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNF24P17028 368 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 HSD17B3P37058 310 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 DCTP40126 519 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 RFC3P40938 356 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 PER3P56645 1201 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 GPR85P60893 370 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 PHEXP78562 749 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 ADORA2A-AS1P86434 159 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 GALNT1Q10472 559 aaPredicted RBP18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 TBL3Q12788 808 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms