RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PRSS56P0CW18 603 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 JUNDP17535 347 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 HIST1H2ADP20671 130 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 CDKN2DP55273 166 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 Q6ZPB1 254 aaPredicted RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 ERN2Q76MJ5 926 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GALNT10Q86SR1 603 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GLRX5Q86SX6 157 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 C9orf43Q8TAL5 461 aaPredicted RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 PIH1D2Q8WWB5 315 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MTFMTQ96DP5 389 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 HIST1H2AHQ96KK5 128 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 ZNF583Q96ND8 569 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 HIST1H2AJQ99878 128 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 H2AFJQ9BTM1 129 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 RIOK2Q9BVS4 552 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 CPEB1Q9BZB8 566 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 POLR2J2Q9GZM3 115 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D24Q9ULP9 559 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 CLCA1A8K7I4 914 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MRPS14O60783 128 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 MTX2O75431 263 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 F8A1P23610 371 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 SDC2P34741 201 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 TALDO1P37837 337 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 AGTR2P50052 363 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 DCDC1P59894 354 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 IL2P60568 153 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GRIK2Q13002 908 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MAD2L1Q13257 205 aaPredicted RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 SNTA1Q13424 505 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 PTGR1Q14914 329 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 ZC3H12BQ5HYM0 836 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 TMEM215Q68D42 235 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 METTL2BQ6P1Q9 378 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 CRTC1Q6UUV9 634 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 CLDN19Q8N6F1 224 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 NETO1Q8TDF5 533 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GPR21Q99679 349 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 PFDN2Q9UHV9 154 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 IFRD1O00458 451 aaPredicted RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 RFXANKO14593 260 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 CASKO14936 926 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MID1O15344 667 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 LRATO95237 230 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 CD160O95971 181 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 PTHP01270 115 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 ZNF30P17039 623 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 HOXB6P17509 224 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 PRDX3P30048 256 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 DAPP51397 102 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 UGT8Q16880 541 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 LYPLAL1Q5VWZ2 237 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 ASB18Q6ZVZ8 466 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 RD3Q7Z3Z2 195 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 Q8N402 240 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 LILRB1Q8NHL6 650 aaPredicted RBP10.42□□□□□ -0.74
LSM3-201ENST00000306024 NUDT8Q8WV74 236 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 OTULINQ96BN8 352 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 SGTBQ96EQ0 304 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 FOPNLQ96NB1 174 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 OSGEPL1Q9H4B0 414 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 TUBB1Q9H4B7 451 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 GORASP2Q9H8Y8 452 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 SCPEP1Q9HB40 452 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 FANCFQ9NPI8 374 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MS4A12Q9NXJ0 267 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 IL17CQ9P0M4 197 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 MLXQ9UH92 298 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 NUMA1Q14980 2115 aa10.42□□□□□ -0.74
LSM3-201ENST00000306024 A0A1W2PQL4 384 aaPredicted RBP10.41□□□□□ -0.74
LSM3-201ENST00000306024 MBTPS2O43462 519 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 IL6P05231 212 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 CKMT1AP12532 417 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 DRD1P21728 446 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 TGFBR2P37173 567 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 OPRD1P41143 372 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 RGS1Q08116 209 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 PUDPQ08623 228 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 NKG7Q16617 165 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 CYP27C1Q4G0S4 372 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 EOGTQ5NDL2 527 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 CCDC190Q86UF4 302 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 ZSWIM9Q86XI8 627 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 SRFBP1Q8NEF9 429 aaKnown RBP10.41□□□□□ -0.74
LSM3-201ENST00000306024 PROKR1Q8TCW9 393 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 TSSK3Q96PN8 268 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 TRPV4Q9HBA0 871 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 POLMQ9NP87 494 aaPredicted RBP10.41□□□□□ -0.74
LSM3-201ENST00000306024 PCDHB16Q9NRJ7 776 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 TAS2R16Q9NYV7 291 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 MAN2B2Q9Y2E5 1009 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 GSTK1Q9Y2Q3 226 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 MAB21L2Q9Y586 359 aa10.41□□□□□ -0.74
LSM3-201ENST00000306024 OR2AG2A6NM03 316 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms