RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GLIPR2Q9H4G4 154 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 RAB23Q9ULC3 237 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 GMEB1Q9Y692 573 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 RHPN2P1A8MT19 583 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 NOBOXO60393 691 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 PROS1P07225 676 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 AFF3P51826 1226 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 NXPH1P58417 271 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 PPP1CAP62136 330 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 MRM1Q6IN84 353 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ADI1Q9BV57 179 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 TMEM38AQ9H6F2 299 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 SYNPO2LQ9H987 977 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 GPATCH2Q9NW75 528 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 M0QX08 132 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 P2RX6O15547 441 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 IST1P53990 364 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 TPD52P55327 224 aaPredicted RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 PRPF38BQ5VTL8 546 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 SEMA6CQ9H3T2 930 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 THEGQ9P2T0 379 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 PROM1O43490 865 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 LSSP48449 732 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ARSFP54793 590 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 MERTKQ12866 999 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 DAG1Q14118 895 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC48A1Q6P1K1 146 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 AHCYL2Q96HN2 611 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 POMT2Q9UKY4 750 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 C9P02748 559 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 BCHEP06276 602 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 RXRGP48443 463 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 DHPSP49366 369 aaPredicted RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 MVDP53602 400 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 IL1RL1Q01638 556 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 REEP3Q6NUK4 255 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 OR5K1Q8NHB7 308 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 XAGE5Q8WWM1 108 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 RAB8BQ92930 207 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 DOHHQ9BU89 302 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 C3orf14Q9HBI5 128 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 SOHLH2Q9NX45 425 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 MS4A12Q9NXJ0 267 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ACOX3O15254 700 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 TNFAIP8O95379 198 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ARAFP10398 606 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ST6GAL1P15907 406 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ALDH4A1P30038 563 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 OLR1P78380 273 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 PRR5P85299 388 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 ZC3H12BQ5HYM0 836 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 PATL1Q86TB9 770 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 REEP1Q9H902 201 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 NTN4Q9HB63 628 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 PDP2Q9P2J9 529 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 PILRAQ9UKJ1 303 aa13.72□□□□□ -0.21
SHCBP1-201ENST00000303383 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 HS6ST1O60243 411 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 DIRAS1O95057 198 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 PTGER1P34995 402 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 FASLGP48023 281 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 MLC1Q15049 377 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 SAMD14Q8IZD0 417 aaPredicted RBP13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 HORMAD2Q8N7B1 307 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 TM4SF19Q96DZ7 209 aa13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 RBM4BQ9BQ04 359 aaKnown RBP13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 RBM4Q9BWF3 364 aaKnown RBP13.71□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 VILLO15195 856 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 SLC28A2O43868 658 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 SEC24DO94855 1032 aaPredicted RBP13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 SELENOWP63302 87 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 IFI44LQ53G44 452 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 STARD5Q9NSY2 213 aa13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 THUMPD1Q9NXG2 353 aaKnown RBP13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 SAMHD1Q9Y3Z3 626 aaKnown RBP13.71□□□□□ -0.22
SHCBP1-201ENST00000303383 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms