RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 COQ7Q99807 217 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 RANGRFQ9HD47 186 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 RPRD1BQ9NQG5 326 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 DMRT3Q9NQL9 472 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 CLEC2DQ9UHP7 191 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 LSM7Q9UK45 103 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 RAB23Q9ULC3 237 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 A0A1W2PRB8 838 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 SLC5A10A0PJK1 596 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 ARHGEF9O43307 516 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 CYP7B1O75881 506 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 MSL3P1P0C860 447 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 ACADMP11310 421 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 CYP2A6P11509 494 aaPredicted RBP18.25■□□□□ 0.51
TRA2A-201ENST00000297071 LIM2P55344 173 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 RIPPLY1Q0D2K3 151 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 C2orf80Q0P641 193 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 FAPQ12884 760 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 C22orf39Q6P5X5 142 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 TRAM1L1Q8N609 369 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 DMRTB1Q96MA1 342 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 TTYH2Q9BSA4 534 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 FAM83DQ9H4H8 585 aa18.25■□□□□ 0.51
TRA2A-201ENST00000297071 NUFIP1Q9UHK0 495 aaKnown RBP18.25■□□□□ 0.51
TRA2A-201ENST00000297071 KIAA1549LQ6ZVL6 1849 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 A0A1W2PQL4 384 aaPredicted RBP18.24■□□□□ 0.51
TRA2A-201ENST00000297071 HEPACAM2A8MVW5 462 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 A8MX80 341 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 PLA2G10O15496 165 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 TMCC2O75069 709 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 H1F0P07305 194 aaKnown RBP18.24■□□□□ 0.51
TRA2A-201ENST00000297071 CKMT1AP12532 417 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 CTGFP29279 349 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 SDC2P34741 201 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 KIR2DL3P43628 341 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 GANABQ14697 944 aaKnown RBP18.24■□□□□ 0.51
TRA2A-201ENST00000297071 RFLNAQ6ZTI6 216 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 HTR3DQ70Z44 454 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 ARMCX6Q7L4S7 300 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 ENKURQ8TC29 256 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 FGF11Q92914 225 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 NEURL3Q96EH8 262 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 DIRAS2Q96HU8 199 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 IL4I1Q96RQ9 567 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 NELL2Q99435 816 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 GTPBP2Q9BX10 602 aaKnown RBP18.24■□□□□ 0.51
TRA2A-201ENST00000297071 NLNQ9BYT8 704 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 MMP28Q9H239 520 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 B4GALT6Q9UBX8 382 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 SF3B6Q9Y3B4 125 aaKnown RBP18.24■□□□□ 0.51
TRA2A-201ENST00000297071 ASB4Q9Y574 426 aa18.24■□□□□ 0.51
TRA2A-201ENST00000297071 TRBV4-1A0A0J9YWV2 114 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 WASH3PC4AMC7 463 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 CFL1P23528 166 aaKnown RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 IL12RB1P42701 662 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 MAP2K3P46734 347 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 DGKGP49619 791 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 EFNB1P98172 346 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 HIST2H2AA3Q6FI13 130 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 CD200R1LQ6Q8B3 271 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF730Q6ZMV8 503 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 QSOX2Q6ZRP7 698 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 TMEM150AQ86TG1 271 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 CRIPAKQ8N1N5 446 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 GPR156Q8NFN8 814 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 OR52I1Q8NGK6 324 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 TMEM163Q8TC26 289 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 BCL7CQ8WUZ0 217 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 UBE2E3Q969T4 207 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 TMEM159Q96B96 161 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF764Q96H86 408 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 FOPNLQ96NB1 174 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 PKP4Q99569 1192 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 C11orf16Q9NQ32 467 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 RBFOX1Q9NWB1 397 aaKnown RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 ZSCAN32Q9NX65 697 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 DNAJC27Q9NZQ0 273 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 GSTK1Q9Y2Q3 226 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 MAP4K5Q9Y4K4 846 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 NDUFB5O43674 189 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 KLHL18O94889 574 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 CELF2O95319 508 aaKnown RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 TP53P04637 393 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 C1GALT1C1LP0DN25 315 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 ALAS2P22557 587 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 POU1F1P28069 291 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 PKLRP30613 574 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 NUDT1P36639 197 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 STK19P49842 368 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 LBX1P52954 281 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 WNT4P56705 351 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 HNRNPA0Q13151 305 aaKnown RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 GPR19Q15760 415 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 Q5BKY6 102 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 SNAP47Q5SQN1 464 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 PGBD2Q6P3X8 592 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 PLET1Q6UQ28 207 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 LAPTM4BQ86VI4 370 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 IFNL1Q8IU54 200 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 SLC43A3Q8NBI5 491 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms