RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 FIGLAQ6QHK4 219 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 MSANTD1Q6ZTZ1 278 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 HHIPQ96QV1 700 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 UCKL1Q9NWZ5 548 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 UNC119BA6NIH7 251 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 RFPL1O75677 317 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 ADORA3P0DMS8 318 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 HERV-K104P61576 105 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 UNC50Q53HI1 259 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
SHANK1-201ENST00000293441 ERMP1Q7Z2K6 904 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 HSPA12BQ96MM6 686 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 MED11Q9P086 117 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 ITIH1P19827 911 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 SHC2P98077 582 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 GINS1Q14691 196 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 NSDHLQ15738 373 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 C18orf21Q32NC0 220 aaPredicted RBP16.56■□□□□ 0.24
SHANK1-201ENST00000293441 OR52P1PQ8NH57 321 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 RHEBL1Q8TAI7 183 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 NUAK1O60285 661 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 BPNT1O95861 308 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 GLP1RP43220 463 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 SEC23BQ15437 767 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 ALG10Q5BKT4 473 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 C10orf62Q5T681 223 aaPredicted RBP16.56■□□□□ 0.24
SHANK1-201ENST00000293441 OR8H3Q8N146 312 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 TEX13DA0A0J9YY54 714 aaPredicted RBP16.56■□□□□ 0.24
SHANK1-201ENST00000293441 C13orf42A0A1B0GVH6 325 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 PORP16435 677 aaPredicted RBP16.56■□□□□ 0.24
SHANK1-201ENST00000293441 TAS2R43P59537 309 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 OR4D1Q15615 310 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 OR51A7Q8NH64 312 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 HERPUD2Q9BSE4 406 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 NPC1O15118 1278 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 P04436 131 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PRSS56P0CW18 603 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 MSX1P28360 303 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 KCNC4Q03721 635 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 OR8S1Q8NH09 359 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 C1orf21Q9H246 121 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 MAN2A2P49641 1150 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 CNPY1Q3B7I2 92 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PEX13Q92968 403 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 NAA11Q9BSU3 229 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 MYH7P12883 1935 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 KANTRA0A1W2PQU2 76 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 SLC15A1P46059 708 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PXNP49023 591 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 ACADVLP49748 655 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 NKAPLQ5M9Q1 402 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 ZSWIM9Q86XI8 627 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 NPWQ8N729 165 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 NLGN4YQ8NFZ3 816 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 S100A16Q96FQ6 103 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 BOCQ9BWV1 1114 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 SLC5A7Q9GZV3 580 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 KCNK12Q9HB15 430 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 IL1RNP18510 177 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 RORAP35398 523 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PELOQ9BRX2 385 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PCDHB16Q9NRJ7 776 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 GOLGA4Q13439 2230 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 LRRC37A3O60309 1634 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 SRCP12931 536 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 S1PR1P21453 382 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 RHDQ02161 417 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 BLMHQ13867 455 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 BOLLQ8N9W6 283 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 THAP4Q8WY91 577 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 TAMM41Q96BW9 452 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 FKBP14Q9NWM8 211 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 ERVK-18Q9QC07 812 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 EXOSC1Q9Y3B2 195 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 BCKDHAP12694 445 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 DEFB103AP81534 67 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 ZC3H14Q6PJT7 736 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 GID4Q8IVV7 300 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 DIO2Q92813 273 aa16.55■□□□□ 0.24
SHANK1-201ENST00000293441 PRR11Q96HE9 360 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 CPEB1Q9BZB8 566 aaKnown RBP16.55■□□□□ 0.24
SHANK1-201ENST00000293441 HNRNPA2B1P22626 353 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 NAA10P41227 235 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 ARSDP51689 593 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 GPR143P51810 404 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 C6orf120Q7Z4R8 191 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 TP53INP2Q8IXH6 220 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 OR5L2Q8NGL0 311 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 SLC6A15Q9H2J7 730 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 MTG2Q9H4K7 406 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 GJD2Q9UKL4 321 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 ITGB1BP2Q9UKP3 347 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 CMAHPQ9Y471 501 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms