RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SYPL1Q16563 259 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 DEFB134Q4QY38 66 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 GPR107Q5VW38 600 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 TMEM107Q6UX40 140 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 ZBTB46Q86UZ6 589 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 DCUN1D5Q9BTE7 237 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 RBM38Q9H0Z9 239 aaKnown RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 SLC35C2Q9NQQ7 365 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 DMTF1Q9Y222 760 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 AIFM1O95831 613 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 ITGA1P56199 1179 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 ID2Q02363 134 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 TBC1D19Q8N5T2 526 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 TTC29Q8NA56 475 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 CHDHQ8NE62 594 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 OR9Q2Q8NGE9 314 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PHF7Q9BWX1 381 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PRDM7Q9NQW5 492 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 CTPS2Q9NRF8 586 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 USE1Q9NZ43 259 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 OR6C2Q9NZP2 312 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 NDUFA13Q9P0J0 144 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 GMPPBQ9Y5P6 360 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 DNAJB6O75190 326 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 SEMG1P04279 462 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 IGHV4-34P06331 123 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 SMN1Q16637 294 aaKnown RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF630Q2M218 657 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF438Q7Z4V0 828 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 TRIM69Q86WT6 500 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 NRROSQ86YC3 692 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PARP8Q8N3A8 854 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PJA1Q8NG27 643 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 TTLQ8NG68 377 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 KAT2AQ92830 837 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 HLA-CQ95604 372 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 CNRIP1Q96F85 164 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 SCARF2Q96GP6 870 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 FEVQ99581 238 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 MAPKAP1Q9BPZ7 522 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 RHNO1Q9BSD3 238 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 FAIM2Q9BWQ8 316 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 FANCEQ9HB96 536 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 STARD5Q9NSY2 213 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 CTSVO60911 334 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 ARAFP10398 606 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 CTSEP14091 401 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 NR4A1P22736 598 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PCBP4P57723 403 aaKnown RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 IQCCQ4KMZ1 466 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 C6orf141Q5SZD1 244 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 PTCRAQ6ISU1 281 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 REEP3Q6NUK4 255 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 DEFB123Q8N688 67 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 OR2L5Q8NG80 312 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 AMDHD1Q96NU7 426 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 COL21A1Q96P44 957 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 NPLQ9BXD5 320 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 DGCR6LQ9BY27 220 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 SERHL2Q9H4I8 314 aa16.99■□□□□ 0.31
CAPN1-201ENST00000279247 FAM32AQ9Y421 112 aaKnown RBP16.99■□□□□ 0.31
CAPN1-201ENST00000279247 TMX2-CTNND1H3BSU7 103 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 TPST2O60704 377 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 APBB3O95704 486 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 THEGLP0DJG4 465 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 NTSP30990 170 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SLC5A2P31639 672 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SMAD4Q13485 552 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 UBXN2BQ14CS0 331 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 EXOC3L2Q2M3D2 409 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 VN1R4Q7Z5H5 301 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 GTPBP3Q969Y2 492 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 GUCD1Q96NT3 240 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SPATA9Q9BWV2 254 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 NAA50Q9GZZ1 169 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 OR51I1Q9H343 314 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 NEUROD4Q9HD90 331 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SNX7Q9UNH6 387 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 AP1M2Q9Y6Q5 423 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SPAG17Q6Q759 2223 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 LOC105369274A0A096LPK9 316 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 LOC102723532A0A0G2JNH3 316 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 KDM1AO60341 852 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 KCNJ13O60928 360 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 ALDH3B2P48448 385 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 CLK3P49761 638 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 LTB4RQ15722 352 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 RBM45Q8IUH3 476 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 OR4N4Q8N0Y3 316 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 SLC5A8Q8N695 610 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 QRSL1Q9H0R6 528 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 NT5DC2Q9H857 520 aa16.98■□□□□ 0.31
CAPN1-201ENST00000279247 POLMQ9NP87 494 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 RSL24D1Q9UHA3 163 aaKnown RBP16.98■□□□□ 0.31
CAPN1-201ENST00000279247 M0R129 80 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 BMP10O95393 424 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ZBTB11O95625 1053 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-201ENST00000279247 NR2F1P10589 423 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 UGT2B7P16662 529 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms