RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 LIM2P55344 173 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 DSTNP60981 165 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 CDK6Q00534 326 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 DUSP2Q05923 314 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 SPDYE7PQ495Y7 208 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 TMEM64Q6YI46 380 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 MARVELD2Q8N4S9 558 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 OSBPL11Q9BXB4 747 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 LYRM4Q9HD34 91 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 IL1RAPQ9NPH3 570 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 ENTPD4Q9Y227 616 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 SLC22A7Q9Y694 548 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 SLC9B1P1A6NJY1 282 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 TMEM229AB2RXF0 380 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 DLGAP1O14490 977 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 CSNK2A2P19784 350 aaPredicted RBP20.84■□□□□ 0.93
CCDC7-201ENST00000277657 VSX2P58304 361 aaPredicted RBP20.84■□□□□ 0.93
CCDC7-201ENST00000277657 ELOAQ14241 798 aaKnown RBP20.84■□□□□ 0.93
CCDC7-201ENST00000277657 C6orf52Q5T4I8 152 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 LYSMD4Q5XG99 296 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 HORMAD2Q8N7B1 307 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 NFKBIDQ8NI38 313 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 TMBIM1Q969X1 311 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 MS4A12Q9NXJ0 267 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 PSME2Q9UL46 239 aa20.84■□□□□ 0.93
CCDC7-201ENST00000277657 A0A1B0GTW7 788 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 ZNF23P17027 643 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 CPN2P22792 545 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 EPHA4P54764 986 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 PCBP3P57721 371 aaKnown RBP20.83■□□□□ 0.92
CCDC7-201ENST00000277657 ZNF750Q32MQ0 723 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 CYBRD1Q53TN4 286 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 ZC3H12BQ5HYM0 836 aaKnown RBP20.83■□□□□ 0.92
CCDC7-201ENST00000277657 NHSL2Q5HYW2 709 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 C6orf132Q5T0Z8 1188 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 PMS2CLQ68D20 193 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 CEACAM20Q6UY09 585 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 VTCN1Q7Z7D3 282 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 ZDHHC21Q8IVQ6 265 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 SLC30A8Q8IWU4 369 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 SLC25A45Q8N413 288 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 ARHGEF39Q8N4T4 335 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 DNAJC22Q8N4W6 341 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 HSH2DQ96JZ2 352 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 MAP3K3Q99759 626 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 CCDC3Q9BQI4 270 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 RAB33BQ9H082 229 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 A4GALTQ9NPC4 353 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 GIMAP4Q9NUV9 329 aa20.83■□□□□ 0.92
CCDC7-201ENST00000277657 A0A1W2PS29 197 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 DNAJB6O75190 326 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 AQP1P29972 269 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 MPIP34949 423 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 GPC1P35052 558 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 RPS26P62854 115 aaKnown RBP20.82■□□□□ 0.92
CCDC7-201ENST00000277657 BNC1Q01954 994 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 PRSS41Q7RTY9 318 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 MCATQ8IVS2 390 aaKnown RBP20.82■□□□□ 0.92
CCDC7-201ENST00000277657 CCDC116Q8IYX3 515 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 SFXN5Q8TD22 340 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 TCTN2Q96GX1 697 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 SEMA3GQ9NS98 782 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 ADPRHL2Q9NX46 363 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 EPHA6Q9UF33 1036 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 TNRC6BQ9UPQ9 1833 aaKnown RBP20.82■□□□□ 0.92
CCDC7-201ENST00000277657 SDK1Q7Z5N4 2213 aa20.82■□□□□ 0.92
CCDC7-201ENST00000277657 EI24O14681 340 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 GALR3O60755 368 aaPredicted RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 GIMD1P0DJR0 217 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 FEN1P39748 380 aaKnown RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 MAGEA8P43361 318 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 RXRGP48443 463 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 BNIP3Q12983 259 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 SPIDRQ14159 915 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 PDK3Q15120 406 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 CRB2Q5IJ48 1285 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 TBC1D20Q96BZ9 403 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 SERHL2Q9H4I8 314 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 TMEM74BQ9NUR3 256 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 ZNF780BQ9Y6R6 833 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 RNF215Q9Y6U7 377 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 CACNA1EQ15878 2313 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 RHPN2P1A8MT19 583 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 SUV39H1O43463 412 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 C9P02748 559 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 C8orf89P0DMQ9 161 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 DHPSP49366 369 aaPredicted RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 SELENOWP63302 87 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 TP53BP2Q13625 1128 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 MYBPC3Q14896 1274 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 SHBQ15464 509 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 DEFB110Q30KQ9 67 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 OR52E8Q6IFG1 317 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 TNFAIP8L2Q6P589 184 aaPredicted RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 TBPL2Q6SJ96 375 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 FAM92BQ6ZTR7 304 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 ZC3H7AQ8IWR0 971 aaKnown RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 CSF3RQ99062 836 aa20.81■□□□□ 0.92
CCDC7-201ENST00000277657 ELF4Q99607 663 aaPredicted RBP20.81■□□□□ 0.92
CCDC7-201ENST00000277657 DOHHQ9BU89 302 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms