RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FOLH1Q04609 750 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 SERTAD2Q14140 314 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 GGTA1PQ4G0N0 100 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 MILR1Q7Z6M3 343 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
HMGN3-201ENST00000275036 TMEM178AQ8NBL3 297 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 MORN4Q8NDC4 146 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 SLC2A12Q8TD20 617 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 DAZLQ92904 295 aaKnown RBP13.41□□□□□ -0.26
HMGN3-201ENST00000275036 PPWD1Q96BP3 646 aaKnown RBP13.41□□□□□ -0.26
HMGN3-201ENST00000275036 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 OR8D2Q9GZM6 311 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 RPF2Q9H7B2 306 aaKnown RBP13.41□□□□□ -0.26
HMGN3-201ENST00000275036 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
HMGN3-201ENST00000275036 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 NINQ8N4C6 2090 aa13.41□□□□□ -0.26
HMGN3-201ENST00000275036 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 SYNDIG1LA6NDD5 238 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 GLOD5A6NK44 160 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 HRKO00198 91 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 CDK2AP1O14519 115 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 FCHO1O14526 889 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 ZNF354AO60765 605 aaPredicted RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 ZFAND5O76080 213 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 PYGBP11216 843 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 TNNI3P19429 210 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 HSD17B3P37058 310 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 STT3AP46977 705 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 HSF1Q00613 529 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 MAPKAPK3Q16644 382 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 UNC50Q53HI1 259 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 ZNF678Q5SXM1 525 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 SH2D5Q6ZV89 423 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 CHERPQ8IWX8 916 aaKnown RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 HORMAD2Q8N7B1 307 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 EIF1ADQ8N9N8 165 aaKnown RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 TRPC4APQ8TEL6 797 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 DOK4Q8TEW6 326 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 ZNF721Q8TF20 911 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 GPR137Q96N19 417 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 SERPINI1Q99574 410 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 LYARQ9NX58 379 aaKnown RBP13.4□□□□□ -0.26
HMGN3-201ENST00000275036 PHF11Q9UIL8 331 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 SH3BGRL2Q9UJC5 107 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 FREM3P0C091 2139 aa13.4□□□□□ -0.26
HMGN3-201ENST00000275036 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.27
HMGN3-201ENST00000275036 TRGV8A0A0C4DH27 118 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 A0A1W2PS29 197 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 WWP2O00308 870 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 OR2J2O76002 312 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 OR4F21O95013 312 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 SEMA3DO95025 777 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 AIFM1O95831 613 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 OTCP00480 354 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 PDYNP01213 254 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 CA7P43166 264 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 SSR4P51571 173 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 HK2P52789 917 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 HERVK_113P63132 956 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 CLCQ05315 142 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 SGO1Q5FBB7 561 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TCHHL1Q5QJ38 904 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TTC19Q6DKK2 380 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-201ENST00000275036 CYP20A1Q6UW02 462 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 CYP4Z2PQ8N1L4 340 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TMEM156Q8N614 296 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 ITLN2Q8WWU7 325 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TANKQ92844 425 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 DGAT2Q96PD7 388 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 ANKZF1Q9H8Y5 726 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 TEX10Q9NXF1 929 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-201ENST00000275036 MYOTQ9UBF9 498 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 EMCNQ9ULC0 261 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 NPIPA1Q9UND3 350 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 YARS2Q9Y2Z4 477 aaKnown RBP13.39□□□□□ -0.27
HMGN3-201ENST00000275036 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
HMGN3-201ENST00000275036 ARHGAP10A1A4S6 786 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 PGRMC2O15173 223 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 SLC19A2O60779 497 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 SUPT7LO94864 414 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 OR6B1O95007 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms