RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 OXR1Q8N573 874 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 OR2L2Q8NH16 312 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 RHOXF1Q8NHV9 184 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 DYNC2LI1Q8TCX1 351 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 TM4SF18Q96CE8 201 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ZG16BQ96DA0 208 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 C16orf58Q96GQ5 468 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 FCRL1Q96LA6 429 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 EPYCQ99645 322 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PIP5K1AQ99755 562 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 CNPPD1Q9BV87 410 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 OR52A5Q9H2C5 316 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 TMCC3Q9ULS5 477 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 HCN4Q9Y3Q4 1203 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PCDHGA2Q9Y5H1 932 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ERI3O43414 337 aaKnown RBP15.8■□□□□ 0.12
VPS54-201ENST00000272322 SULT1C4O75897 302 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ADORA3P0DMS8 318 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ZNF12P17014 697 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 JUNDP17535 347 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PPIBP23284 216 aaKnown RBP15.8■□□□□ 0.12
VPS54-201ENST00000272322 ACADLP28330 430 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 TGFBR2P37173 567 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 REEP3Q6NUK4 255 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 OR4N5Q8IXE1 308 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
VPS54-201ENST00000272322 LINC01555Q8NAE3 123 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 OR14C36Q8NHC7 312 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 DSN1Q9H410 356 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 QPCTLQ9NXS2 382 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PADI2Q9Y2J8 665 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 HELZP42694 1942 aaKnown RBP15.8■□□□□ 0.12
VPS54-201ENST00000272322 CTDSP2O14595 271 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ADAM23O75077 832 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ITGB7P26010 798 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 OPRD1P41143 372 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 MSANTD1Q6ZTZ1 278 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 GPR155Q7Z3F1 870 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 GEMIN6Q8WXD5 167 aaKnown RBP15.8■□□□□ 0.12
VPS54-201ENST00000272322 SLC38A4Q969I6 547 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PRSS16Q9NQE7 514 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ATP6V1HQ9UI12 483 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 PSORS1C1Q9UIG5 152 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 CORO2BQ9UQ03 480 aa15.8■□□□□ 0.12
VPS54-201ENST00000272322 ZW10O43264 779 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 CBFA2T3O75081 653 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 IL1RNP18510 177 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 CDK3Q00526 305 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 ID2Q02363 134 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 C10orf62Q5T681 223 aaPredicted RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 TMEFF1Q8IYR6 380 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 GPR32P1Q8NGA4 272 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 BBS4Q96RK4 519 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 AIF1LQ9BQI0 150 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 SLIRPQ9GZT3 109 aaKnown RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 CARD8Q9Y2G2 431 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 OBSL1O75147 1896 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 SNRNP200O75643 2136 aaKnown RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 EDDM13A0A1B0GTR0 161 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 TLX2O43763 284 aaPredicted RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 CNOT3O75175 753 aaKnown RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 KRT75O95678 551 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 NCBP2P52298 156 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS54-201ENST00000272322 GPAT3Q53EU6 434 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 B3GLCTQ6Y288 498 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 FAM43BQ6ZT52 329 aaPredicted RBP15.79■□□□□ 0.12
VPS54-201ENST00000272322 LRRTM4Q86VH4 590 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 ARMC8Q8IUR7 673 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 DPH7Q9BTV6 452 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 GABARAPL1Q9H0R8 117 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 DKK3Q9UBP4 350 aa15.79■□□□□ 0.12
VPS54-201ENST00000272322 NPIPB8E9PQR5 432 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 KDM1AO60341 852 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 ANXA8P13928 327 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 KELP23276 732 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 CDC42P60953 191 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 ALDH6A1Q02252 535 aaKnown RBP15.78■□□□□ 0.12
VPS54-201ENST00000272322 CBX3Q13185 183 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 PNCKQ6P2M8 343 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 VITQ6UXI7 678 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 SPATC1Q76KD6 591 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 LRRC56Q8IYG6 542 aaPredicted RBP15.78■□□□□ 0.12
VPS54-201ENST00000272322 OR6Q1Q8NGQ2 317 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 KAT2AQ92830 837 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 MYDGFQ969H8 173 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 INSM2Q96T92 566 aaPredicted RBP15.78■□□□□ 0.12
VPS54-201ENST00000272322 NEURL2Q9BR09 285 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 RHBGQ9H310 441 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 ERVK13-1Q9NX77 482 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 NAALAD2Q9Y3Q0 740 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 ENPP4Q9Y6X5 453 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 HYAL3O43820 417 aaPredicted RBP15.78■□□□□ 0.12
VPS54-201ENST00000272322 NDUFAF5Q5TEU4 345 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 C18orf63Q68DL7 685 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 FRMPD2BQ6IN97 320 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 DCUN1D3Q8IWE4 304 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 LAS2Q8IYD9 372 aa15.78■□□□□ 0.12
VPS54-201ENST00000272322 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms